Protein–RNA interactions for Protein: P18846

ATF1, Cyclic AMP-dependent transcription factor ATF-1, humanhuman

Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF1P18846 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
ATF1P18846 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
ATF1P18846 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
ATF1P18846 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
ATF1P18846 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
ATF1P18846 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
ATF1P18846 MTDHP2-201ENST00000601468 714 ntBASIC18.99■□□□□ 0.63
ATF1P18846 AC009086.3-201ENST00000623486 1008 ntBASIC18.99■□□□□ 0.63
ATF1P18846 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
ATF1P18846 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC18.99■□□□□ 0.63
ATF1P18846 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC18.99■□□□□ 0.63
ATF1P18846 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
ATF1P18846 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
ATF1P18846 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
ATF1P18846 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
ATF1P18846 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
ATF1P18846 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
ATF1P18846 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
ATF1P18846 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
ATF1P18846 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
ATF1P18846 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
ATF1P18846 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
ATF1P18846 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
ATF1P18846 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
ATF1P18846 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC18.97■□□□□ 0.63
ATF1P18846 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
ATF1P18846 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
ATF1P18846 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC18.97■□□□□ 0.63
ATF1P18846 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
ATF1P18846 MIR4787-201ENST00000607364 84 ntBASIC18.97■□□□□ 0.63
ATF1P18846 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC18.97■□□□□ 0.63
ATF1P18846 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
ATF1P18846 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
ATF1P18846 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC18.97■□□□□ 0.63
ATF1P18846 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
ATF1P18846 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC18.97■□□□□ 0.63
ATF1P18846 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
ATF1P18846 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
ATF1P18846 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC18.97■□□□□ 0.63
ATF1P18846 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
ATF1P18846 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
ATF1P18846 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
ATF1P18846 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC18.96■□□□□ 0.63
ATF1P18846 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC18.96■□□□□ 0.63
ATF1P18846 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
ATF1P18846 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
ATF1P18846 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
ATF1P18846 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC18.96■□□□□ 0.63
ATF1P18846 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC18.96■□□□□ 0.63
ATF1P18846 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
ATF1P18846 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC18.96■□□□□ 0.63
ATF1P18846 NKILA-201ENST00000613231 537 ntTSL 4 BASIC18.96■□□□□ 0.63
ATF1P18846 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
ATF1P18846 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
ATF1P18846 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
ATF1P18846 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
ATF1P18846 AC009102.2-201ENST00000606772 1639 ntBASIC18.96■□□□□ 0.63
ATF1P18846 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
ATF1P18846 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
ATF1P18846 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
ATF1P18846 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
ATF1P18846 CD72-202ENST00000378430 585 ntTSL 3 BASIC18.95■□□□□ 0.62
ATF1P18846 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
ATF1P18846 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC18.95■□□□□ 0.62
ATF1P18846 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
ATF1P18846 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
ATF1P18846 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
ATF1P18846 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
ATF1P18846 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
ATF1P18846 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC18.95■□□□□ 0.62
ATF1P18846 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
ATF1P18846 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
ATF1P18846 GOLGA2P6-201ENST00000340929 2049 ntBASIC18.95■□□□□ 0.62
ATF1P18846 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
ATF1P18846 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
ATF1P18846 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC18.94■□□□□ 0.62
ATF1P18846 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
ATF1P18846 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC18.94■□□□□ 0.62
ATF1P18846 HES6-204ENST00000409182 863 ntTSL 2 BASIC18.94■□□□□ 0.62
ATF1P18846 RARRES2P1-201ENST00000474487 481 ntBASIC18.94■□□□□ 0.62
ATF1P18846 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC18.94■□□□□ 0.62
ATF1P18846 EXOG-217ENST00000630638 197 ntTSL 5 BASIC18.94■□□□□ 0.62
ATF1P18846 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC18.94■□□□□ 0.62
ATF1P18846 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
ATF1P18846 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
ATF1P18846 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
ATF1P18846 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
ATF1P18846 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
ATF1P18846 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
ATF1P18846 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
ATF1P18846 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
ATF1P18846 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
ATF1P18846 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
ATF1P18846 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
ATF1P18846 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
ATF1P18846 AC239859.2-201ENST00000444165 318 ntBASIC18.93■□□□□ 0.62
ATF1P18846 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
ATF1P18846 AC010997.5-201ENST00000609182 354 ntBASIC18.93■□□□□ 0.62
ATF1P18846 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
ATF1P18846 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC18.93■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms