Protein–RNA interactions for Protein: P13765

HLA-DOB, HLA class II histocompatibility antigen, DO beta chain, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOBP13765 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC19.45■□□□□ 0.7
HLA-DOBP13765 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
HLA-DOBP13765 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
HLA-DOBP13765 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
HLA-DOBP13765 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
HLA-DOBP13765 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
HLA-DOBP13765 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
HLA-DOBP13765 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
HLA-DOBP13765 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
HLA-DOBP13765 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
HLA-DOBP13765 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
HLA-DOBP13765 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC19.44■□□□□ 0.7
HLA-DOBP13765 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
HLA-DOBP13765 AC135279.3-201ENST00000610945 1311 ntBASIC19.44■□□□□ 0.7
HLA-DOBP13765 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
HLA-DOBP13765 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
HLA-DOBP13765 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
HLA-DOBP13765 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC19.43■□□□□ 0.7
HLA-DOBP13765 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC19.43■□□□□ 0.7
HLA-DOBP13765 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
HLA-DOBP13765 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
HLA-DOBP13765 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
HLA-DOBP13765 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
HLA-DOBP13765 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC19.43■□□□□ 0.7
HLA-DOBP13765 SNX3-202ENST00000349379 890 ntTSL 2 BASIC19.43■□□□□ 0.7
HLA-DOBP13765 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC19.43■□□□□ 0.7
HLA-DOBP13765 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC19.43■□□□□ 0.7
HLA-DOBP13765 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
HLA-DOBP13765 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC19.43■□□□□ 0.7
HLA-DOBP13765 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC19.43■□□□□ 0.7
HLA-DOBP13765 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
HLA-DOBP13765 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC19.42■□□□□ 0.7
HLA-DOBP13765 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
HLA-DOBP13765 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
HLA-DOBP13765 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
HLA-DOBP13765 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
HLA-DOBP13765 PBX2P1-201ENST00000493219 1291 ntBASIC19.42■□□□□ 0.7
HLA-DOBP13765 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC19.42■□□□□ 0.7
HLA-DOBP13765 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC19.42■□□□□ 0.7
HLA-DOBP13765 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
HLA-DOBP13765 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC19.42■□□□□ 0.7
HLA-DOBP13765 C11orf96-202ENST00000528572 1834 ntBASIC19.41■□□□□ 0.7
HLA-DOBP13765 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
HLA-DOBP13765 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
HLA-DOBP13765 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC19.41■□□□□ 0.7
HLA-DOBP13765 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
HLA-DOBP13765 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
HLA-DOBP13765 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC19.41■□□□□ 0.7
HLA-DOBP13765 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
HLA-DOBP13765 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC19.41■□□□□ 0.7
HLA-DOBP13765 AC110285.6-201ENST00000617652 491 ntBASIC19.41■□□□□ 0.7
HLA-DOBP13765 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC19.41■□□□□ 0.7
HLA-DOBP13765 AC068587.7-201ENST00000641602 218 ntBASIC19.41■□□□□ 0.7
HLA-DOBP13765 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
HLA-DOBP13765 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
HLA-DOBP13765 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
HLA-DOBP13765 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
HLA-DOBP13765 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC19.41■□□□□ 0.7
HLA-DOBP13765 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
HLA-DOBP13765 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
HLA-DOBP13765 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
HLA-DOBP13765 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
HLA-DOBP13765 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
HLA-DOBP13765 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
HLA-DOBP13765 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC19.4■□□□□ 0.7
HLA-DOBP13765 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
HLA-DOBP13765 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
HLA-DOBP13765 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
HLA-DOBP13765 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
HLA-DOBP13765 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
HLA-DOBP13765 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
HLA-DOBP13765 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
HLA-DOBP13765 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC19.4■□□□□ 0.7
HLA-DOBP13765 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
HLA-DOBP13765 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
HLA-DOBP13765 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
HLA-DOBP13765 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
HLA-DOBP13765 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
HLA-DOBP13765 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
HLA-DOBP13765 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC19.4■□□□□ 0.7
HLA-DOBP13765 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
HLA-DOBP13765 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
HLA-DOBP13765 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
HLA-DOBP13765 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
HLA-DOBP13765 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC19.39■□□□□ 0.69
HLA-DOBP13765 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC19.39■□□□□ 0.69
HLA-DOBP13765 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC19.39■□□□□ 0.69
HLA-DOBP13765 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC19.39■□□□□ 0.69
HLA-DOBP13765 AC079089.2-201ENST00000531211 1277 ntBASIC19.39■□□□□ 0.69
HLA-DOBP13765 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC19.39■□□□□ 0.69
HLA-DOBP13765 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
HLA-DOBP13765 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC19.39■□□□□ 0.69
HLA-DOBP13765 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
HLA-DOBP13765 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
HLA-DOBP13765 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
HLA-DOBP13765 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
HLA-DOBP13765 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
HLA-DOBP13765 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
HLA-DOBP13765 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
HLA-DOBP13765 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms