Protein–RNA interactions for Protein: P04035

HMGCR, 3-hydroxy-3-methylglutaryl-coenzyme A reductase, humanhuman

Predictions only

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCRP04035 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC24.67■■□□□ 1.54
HMGCRP04035 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC24.67■■□□□ 1.54
HMGCRP04035 AC009237.3-201ENST00000393279 1427 ntBASIC24.67■■□□□ 1.54
HMGCRP04035 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC24.66■■□□□ 1.54
HMGCRP04035 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
HMGCRP04035 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC24.66■■□□□ 1.54
HMGCRP04035 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC24.66■■□□□ 1.54
HMGCRP04035 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
HMGCRP04035 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC24.66■■□□□ 1.54
HMGCRP04035 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC24.66■■□□□ 1.54
HMGCRP04035 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC24.66■■□□□ 1.54
HMGCRP04035 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
HMGCRP04035 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
HMGCRP04035 AC079630.1-202ENST00000618127 1840 ntBASIC24.65■■□□□ 1.54
HMGCRP04035 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
HMGCRP04035 USP45-205ENST00000472914 1617 ntTSL 5 BASIC24.65■■□□□ 1.54
HMGCRP04035 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
HMGCRP04035 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC24.65■■□□□ 1.54
HMGCRP04035 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
HMGCRP04035 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC24.65■■□□□ 1.54
HMGCRP04035 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC24.65■■□□□ 1.54
HMGCRP04035 AC105036.2-201ENST00000569468 176 ntBASIC24.65■■□□□ 1.54
HMGCRP04035 AC133552.2-202ENST00000575694 574 ntBASIC24.65■■□□□ 1.54
HMGCRP04035 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC24.65■■□□□ 1.54
HMGCRP04035 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
HMGCRP04035 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC24.65■■□□□ 1.54
HMGCRP04035 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
HMGCRP04035 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
HMGCRP04035 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
HMGCRP04035 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC24.64■■□□□ 1.54
HMGCRP04035 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC24.64■■□□□ 1.54
HMGCRP04035 AC098934.4-201ENST00000564127 592 ntBASIC24.64■■□□□ 1.54
HMGCRP04035 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC24.64■■□□□ 1.54
HMGCRP04035 AP001160.3-201ENST00000601484 763 ntBASIC24.64■■□□□ 1.54
HMGCRP04035 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC24.64■■□□□ 1.53
HMGCRP04035 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC24.64■■□□□ 1.53
HMGCRP04035 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
HMGCRP04035 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC24.63■■□□□ 1.53
HMGCRP04035 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
HMGCRP04035 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC24.63■■□□□ 1.53
HMGCRP04035 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
HMGCRP04035 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC24.63■■□□□ 1.53
HMGCRP04035 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC24.63■■□□□ 1.53
HMGCRP04035 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
HMGCRP04035 CNN2P6-201ENST00000439038 900 ntBASIC24.63■■□□□ 1.53
HMGCRP04035 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
HMGCRP04035 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC24.63■■□□□ 1.53
HMGCRP04035 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
HMGCRP04035 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
HMGCRP04035 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC24.62■■□□□ 1.53
HMGCRP04035 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
HMGCRP04035 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC24.62■■□□□ 1.53
HMGCRP04035 POU5F1P3-201ENST00000428824 1078 ntBASIC24.62■■□□□ 1.53
HMGCRP04035 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC24.62■■□□□ 1.53
HMGCRP04035 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC24.62■■□□□ 1.53
HMGCRP04035 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC24.62■■□□□ 1.53
HMGCRP04035 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
HMGCRP04035 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC24.61■■□□□ 1.53
HMGCRP04035 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
HMGCRP04035 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC24.61■■□□□ 1.53
HMGCRP04035 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
HMGCRP04035 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
HMGCRP04035 ITM2C-210ENST00000620962 501 ntBASIC24.61■■□□□ 1.53
HMGCRP04035 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC24.61■■□□□ 1.53
HMGCRP04035 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
HMGCRP04035 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC24.61■■□□□ 1.53
HMGCRP04035 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC24.6■■□□□ 1.53
HMGCRP04035 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC24.6■■□□□ 1.53
HMGCRP04035 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC24.6■■□□□ 1.53
HMGCRP04035 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
HMGCRP04035 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC24.6■■□□□ 1.53
HMGCRP04035 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC24.6■■□□□ 1.53
HMGCRP04035 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC24.6■■□□□ 1.53
HMGCRP04035 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC24.6■■□□□ 1.53
HMGCRP04035 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
HMGCRP04035 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC24.6■■□□□ 1.53
HMGCRP04035 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
HMGCRP04035 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC24.59■■□□□ 1.53
HMGCRP04035 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC24.59■■□□□ 1.53
HMGCRP04035 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
HMGCRP04035 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
HMGCRP04035 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC24.59■■□□□ 1.53
HMGCRP04035 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC24.59■■□□□ 1.53
HMGCRP04035 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC24.59■■□□□ 1.53
HMGCRP04035 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC24.59■■□□□ 1.53
HMGCRP04035 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
HMGCRP04035 LINC01124-201ENST00000409786 2117 ntBASIC24.58■■□□□ 1.53
HMGCRP04035 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC24.58■■□□□ 1.53
HMGCRP04035 MFF-207ENST00000409565 1548 ntTSL 2 BASIC24.58■■□□□ 1.53
HMGCRP04035 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC24.58■■□□□ 1.53
HMGCRP04035 APTR-203ENST00000430801 583 ntTSL 5 BASIC24.58■■□□□ 1.53
HMGCRP04035 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC24.58■■□□□ 1.53
HMGCRP04035 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
HMGCRP04035 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC24.58■■□□□ 1.52
HMGCRP04035 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC24.58■■□□□ 1.52
HMGCRP04035 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC24.57■■□□□ 1.52
HMGCRP04035 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC24.57■■□□□ 1.52
HMGCRP04035 KRT18P29-201ENST00000397031 1267 ntBASIC24.57■■□□□ 1.52
HMGCRP04035 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC24.57■■□□□ 1.52
HMGCRP04035 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC24.57■■□□□ 1.52
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms