Protein–RNA interactions for Protein: O95749

GGPS1, Geranylgeranyl pyrophosphate synthase, humanhuman

Predictions only

Length 300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1O95749 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC24.46■■□□□ 1.51
GGPS1O95749 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
GGPS1O95749 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC24.46■■□□□ 1.51
GGPS1O95749 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC24.45■■□□□ 1.51
GGPS1O95749 AC012676.1-201ENST00000574705 1949 ntBASIC24.45■■□□□ 1.51
GGPS1O95749 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC24.45■■□□□ 1.5
GGPS1O95749 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC24.45■■□□□ 1.5
GGPS1O95749 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
GGPS1O95749 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC24.45■■□□□ 1.5
GGPS1O95749 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC24.44■■□□□ 1.5
GGPS1O95749 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
GGPS1O95749 VPS53-216ENST00000574029 585 ntTSL 4 BASIC24.44■■□□□ 1.5
GGPS1O95749 LINC01960-201ENST00000563759 1884 ntBASIC24.44■■□□□ 1.5
GGPS1O95749 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
GGPS1O95749 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
GGPS1O95749 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
GGPS1O95749 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC24.44■■□□□ 1.5
GGPS1O95749 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC24.44■■□□□ 1.5
GGPS1O95749 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
GGPS1O95749 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
GGPS1O95749 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
GGPS1O95749 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
GGPS1O95749 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
GGPS1O95749 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
GGPS1O95749 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC24.43■■□□□ 1.5
GGPS1O95749 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC24.43■■□□□ 1.5
GGPS1O95749 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC24.43■■□□□ 1.5
GGPS1O95749 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
GGPS1O95749 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
GGPS1O95749 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
GGPS1O95749 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC24.42■■□□□ 1.5
GGPS1O95749 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC24.42■■□□□ 1.5
GGPS1O95749 AC137761.2-201ENST00000561729 223 ntBASIC24.42■■□□□ 1.5
GGPS1O95749 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC24.42■■□□□ 1.5
GGPS1O95749 AC145350.3-201ENST00000569033 163 ntBASIC24.42■■□□□ 1.5
GGPS1O95749 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
GGPS1O95749 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC24.42■■□□□ 1.5
GGPS1O95749 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
GGPS1O95749 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC24.41■■□□□ 1.5
GGPS1O95749 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC24.41■■□□□ 1.5
GGPS1O95749 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC24.41■■□□□ 1.5
GGPS1O95749 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC24.41■■□□□ 1.5
GGPS1O95749 STX7-201ENST00000367937 1090 ntTSL 5 BASIC24.41■■□□□ 1.5
GGPS1O95749 AC006015.1-201ENST00000429970 570 ntBASIC24.41■■□□□ 1.5
GGPS1O95749 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC24.41■■□□□ 1.5
GGPS1O95749 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC24.41■■□□□ 1.5
GGPS1O95749 DBI-210ENST00000542275 757 ntTSL 5 BASIC24.41■■□□□ 1.5
GGPS1O95749 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC24.41■■□□□ 1.5
GGPS1O95749 CPT2-209ENST00000636935 803 ntTSL 5 BASIC24.41■■□□□ 1.5
GGPS1O95749 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC24.41■■□□□ 1.5
GGPS1O95749 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
GGPS1O95749 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
GGPS1O95749 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
GGPS1O95749 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC24.41■■□□□ 1.5
GGPS1O95749 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC24.41■■□□□ 1.5
GGPS1O95749 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC24.41■■□□□ 1.5
GGPS1O95749 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC24.4■■□□□ 1.5
GGPS1O95749 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC24.4■■□□□ 1.5
GGPS1O95749 AC016769.1-201ENST00000409132 1010 ntBASIC24.4■■□□□ 1.5
GGPS1O95749 AC079140.4-201ENST00000507448 529 ntBASIC24.4■■□□□ 1.5
GGPS1O95749 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
GGPS1O95749 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC24.4■■□□□ 1.5
GGPS1O95749 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC24.4■■□□□ 1.5
GGPS1O95749 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
GGPS1O95749 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC24.39■■□□□ 1.5
GGPS1O95749 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC24.39■■□□□ 1.5
GGPS1O95749 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC24.39■■□□□ 1.5
GGPS1O95749 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC24.39■■□□□ 1.49
GGPS1O95749 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC24.39■■□□□ 1.49
GGPS1O95749 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC24.39■■□□□ 1.49
GGPS1O95749 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
GGPS1O95749 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
GGPS1O95749 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC24.38■■□□□ 1.49
GGPS1O95749 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
GGPS1O95749 AC005224.4-201ENST00000583262 1652 ntBASIC24.38■■□□□ 1.49
GGPS1O95749 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
GGPS1O95749 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC24.38■■□□□ 1.49
GGPS1O95749 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC24.38■■□□□ 1.49
GGPS1O95749 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC24.38■■□□□ 1.49
GGPS1O95749 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC24.38■■□□□ 1.49
GGPS1O95749 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC24.38■■□□□ 1.49
GGPS1O95749 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
GGPS1O95749 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
GGPS1O95749 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
GGPS1O95749 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
GGPS1O95749 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC24.38■■□□□ 1.49
GGPS1O95749 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC24.37■■□□□ 1.49
GGPS1O95749 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC24.37■■□□□ 1.49
GGPS1O95749 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
GGPS1O95749 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
GGPS1O95749 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC24.37■■□□□ 1.49
GGPS1O95749 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC24.37■■□□□ 1.49
GGPS1O95749 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
GGPS1O95749 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC24.37■■□□□ 1.49
GGPS1O95749 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC24.37■■□□□ 1.49
GGPS1O95749 CASK-201ENST00000378154 2494 ntTSL 5 BASIC24.37■■□□□ 1.49
GGPS1O95749 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
GGPS1O95749 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC24.36■■□□□ 1.49
GGPS1O95749 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
GGPS1O95749 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC24.36■■□□□ 1.49
Retrieved 100 of 98,524 protein–RNA pairs in 17.8 ms