Protein–RNA interactions for Protein: O95475

SIX6, Homeobox protein SIX6, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX6O95475 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
SIX6O95475 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SIX6O95475 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SIX6O95475 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
SIX6O95475 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC18.11■□□□□ 0.49
SIX6O95475 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
SIX6O95475 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC18.11■□□□□ 0.49
SIX6O95475 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC18.11■□□□□ 0.49
SIX6O95475 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SIX6O95475 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
SIX6O95475 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC18.11■□□□□ 0.49
SIX6O95475 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SIX6O95475 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC18.11■□□□□ 0.49
SIX6O95475 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SIX6O95475 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SIX6O95475 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
SIX6O95475 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
SIX6O95475 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC18.11■□□□□ 0.49
SIX6O95475 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
SIX6O95475 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SIX6O95475 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SIX6O95475 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
SIX6O95475 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SIX6O95475 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
SIX6O95475 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SIX6O95475 GOLGA2P6-201ENST00000340929 2049 ntBASIC18.1■□□□□ 0.49
SIX6O95475 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SIX6O95475 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
SIX6O95475 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SIX6O95475 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC18.1■□□□□ 0.49
SIX6O95475 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SIX6O95475 AL592295.1-201ENST00000400984 884 ntBASIC18.1■□□□□ 0.49
SIX6O95475 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC18.1■□□□□ 0.49
SIX6O95475 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SIX6O95475 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
SIX6O95475 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC18.09■□□□□ 0.49
SIX6O95475 AC144652.1-201ENST00000609974 1624 ntBASIC18.09■□□□□ 0.49
SIX6O95475 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SIX6O95475 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
SIX6O95475 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC18.09■□□□□ 0.49
SIX6O95475 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SIX6O95475 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC18.09■□□□□ 0.49
SIX6O95475 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SIX6O95475 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC18.09■□□□□ 0.49
SIX6O95475 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
SIX6O95475 AC007029.1-201ENST00000604183 313 ntBASIC18.09■□□□□ 0.49
SIX6O95475 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SIX6O95475 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
SIX6O95475 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC18.09■□□□□ 0.49
SIX6O95475 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
SIX6O95475 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
SIX6O95475 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
SIX6O95475 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
SIX6O95475 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SIX6O95475 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SIX6O95475 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SIX6O95475 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SIX6O95475 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SIX6O95475 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC18.09■□□□□ 0.49
SIX6O95475 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC18.08■□□□□ 0.49
SIX6O95475 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
SIX6O95475 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.49
SIX6O95475 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
SIX6O95475 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC18.08■□□□□ 0.49
SIX6O95475 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC18.08■□□□□ 0.49
SIX6O95475 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
SIX6O95475 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
SIX6O95475 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC18.08■□□□□ 0.48
SIX6O95475 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
SIX6O95475 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
SIX6O95475 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
SIX6O95475 TUB-203ENST00000534099 1759 ntTSL 2 BASIC18.08■□□□□ 0.48
SIX6O95475 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
SIX6O95475 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
SIX6O95475 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
SIX6O95475 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC18.08■□□□□ 0.48
SIX6O95475 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
SIX6O95475 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
SIX6O95475 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
SIX6O95475 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC18.07■□□□□ 0.48
SIX6O95475 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC18.07■□□□□ 0.48
SIX6O95475 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC18.07■□□□□ 0.48
SIX6O95475 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SIX6O95475 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC18.07■□□□□ 0.48
SIX6O95475 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC18.07■□□□□ 0.48
SIX6O95475 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC18.07■□□□□ 0.48
SIX6O95475 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SIX6O95475 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
SIX6O95475 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
SIX6O95475 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC18.06■□□□□ 0.48
SIX6O95475 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC18.06■□□□□ 0.48
SIX6O95475 ZNRF2P2-203ENST00000454624 420 ntBASIC18.06■□□□□ 0.48
SIX6O95475 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SIX6O95475 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SIX6O95475 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SIX6O95475 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC18.06■□□□□ 0.48
SIX6O95475 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SIX6O95475 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
SIX6O95475 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC18.06■□□□□ 0.48
SIX6O95475 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC18.06■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms