Protein–RNA interactions for Protein: O95164

UBL3, Ubiquitin-like protein 3, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBL3O95164 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
UBL3O95164 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
UBL3O95164 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
UBL3O95164 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
UBL3O95164 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC19.38■□□□□ 0.69
UBL3O95164 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
UBL3O95164 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC19.38■□□□□ 0.69
UBL3O95164 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
UBL3O95164 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
UBL3O95164 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
UBL3O95164 MIR3181-201ENST00000578512 73 ntBASIC19.38■□□□□ 0.69
UBL3O95164 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC19.38■□□□□ 0.69
UBL3O95164 GTSE1-AS1-202ENST00000623117 1518 ntBASIC19.38■□□□□ 0.69
UBL3O95164 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
UBL3O95164 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
UBL3O95164 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC19.37■□□□□ 0.69
UBL3O95164 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC19.37■□□□□ 0.69
UBL3O95164 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
UBL3O95164 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
UBL3O95164 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
UBL3O95164 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
UBL3O95164 SERBP1P1-201ENST00000396021 1160 ntBASIC19.37■□□□□ 0.69
UBL3O95164 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
UBL3O95164 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC19.37■□□□□ 0.69
UBL3O95164 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
UBL3O95164 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
UBL3O95164 AC011298.3-201ENST00000615796 283 ntBASIC19.37■□□□□ 0.69
UBL3O95164 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
UBL3O95164 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
UBL3O95164 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
UBL3O95164 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
UBL3O95164 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC19.36■□□□□ 0.69
UBL3O95164 UNC93B3-201ENST00000308076 687 ntBASIC19.36■□□□□ 0.69
UBL3O95164 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
UBL3O95164 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
UBL3O95164 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC19.36■□□□□ 0.69
UBL3O95164 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
UBL3O95164 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
UBL3O95164 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
UBL3O95164 AC133637.1-201ENST00000624115 1537 ntBASIC19.35■□□□□ 0.69
UBL3O95164 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
UBL3O95164 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
UBL3O95164 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
UBL3O95164 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
UBL3O95164 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
UBL3O95164 FBXW4P1-201ENST00000426721 2239 ntBASIC19.35■□□□□ 0.69
UBL3O95164 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
UBL3O95164 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC19.35■□□□□ 0.69
UBL3O95164 HES6-206ENST00000409574 738 ntTSL 2 BASIC19.35■□□□□ 0.69
UBL3O95164 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC19.35■□□□□ 0.69
UBL3O95164 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC19.35■□□□□ 0.69
UBL3O95164 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC19.35■□□□□ 0.69
UBL3O95164 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
UBL3O95164 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
UBL3O95164 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
UBL3O95164 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
UBL3O95164 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
UBL3O95164 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
UBL3O95164 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
UBL3O95164 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
UBL3O95164 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
UBL3O95164 AC096631.2-201ENST00000436136 790 ntBASIC19.34■□□□□ 0.69
UBL3O95164 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC19.34■□□□□ 0.69
UBL3O95164 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC19.34■□□□□ 0.69
UBL3O95164 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
UBL3O95164 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
UBL3O95164 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
UBL3O95164 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC19.34■□□□□ 0.69
UBL3O95164 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
UBL3O95164 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
UBL3O95164 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC19.34■□□□□ 0.69
UBL3O95164 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC19.34■□□□□ 0.69
UBL3O95164 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC19.34■□□□□ 0.69
UBL3O95164 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
UBL3O95164 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC19.33■□□□□ 0.69
UBL3O95164 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
UBL3O95164 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
UBL3O95164 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC19.33■□□□□ 0.69
UBL3O95164 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
UBL3O95164 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.69
UBL3O95164 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC19.33■□□□□ 0.69
UBL3O95164 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
UBL3O95164 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
UBL3O95164 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC19.33■□□□□ 0.69
UBL3O95164 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
UBL3O95164 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
UBL3O95164 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
UBL3O95164 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
UBL3O95164 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC19.33■□□□□ 0.68
UBL3O95164 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
UBL3O95164 AL136162.1-201ENST00000607711 1078 ntBASIC19.33■□□□□ 0.68
UBL3O95164 AC136469.2-201ENST00000623944 1028 ntBASIC19.33■□□□□ 0.68
UBL3O95164 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
UBL3O95164 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC19.33■□□□□ 0.68
UBL3O95164 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
UBL3O95164 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
UBL3O95164 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC19.32■□□□□ 0.68
UBL3O95164 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC19.32■□□□□ 0.68
UBL3O95164 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC19.32■□□□□ 0.68
UBL3O95164 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms