Protein–RNA interactions for Protein: O95155

UBE4B, Ubiquitin conjugation factor E4 B, humanhuman

Predictions only

Length 1,302 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4BO95155 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
UBE4BO95155 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
UBE4BO95155 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC23.8■■□□□ 1.4
UBE4BO95155 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC23.8■■□□□ 1.4
UBE4BO95155 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC23.8■■□□□ 1.4
UBE4BO95155 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC23.8■■□□□ 1.4
UBE4BO95155 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
UBE4BO95155 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC23.8■■□□□ 1.4
UBE4BO95155 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
UBE4BO95155 RALB-208ENST00000631312 311 ntTSL 5 BASIC23.8■■□□□ 1.4
UBE4BO95155 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC23.79■■□□□ 1.4
UBE4BO95155 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC23.79■■□□□ 1.4
UBE4BO95155 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC23.79■■□□□ 1.4
UBE4BO95155 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
UBE4BO95155 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
UBE4BO95155 C11orf96-202ENST00000528572 1834 ntBASIC23.78■■□□□ 1.4
UBE4BO95155 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC23.78■■□□□ 1.4
UBE4BO95155 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
UBE4BO95155 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
UBE4BO95155 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC23.78■■□□□ 1.4
UBE4BO95155 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
UBE4BO95155 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
UBE4BO95155 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
UBE4BO95155 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
UBE4BO95155 GRAMD4P2-201ENST00000423297 1097 ntBASIC23.78■■□□□ 1.4
UBE4BO95155 SUDS3P1-201ENST00000505831 966 ntBASIC23.78■■□□□ 1.4
UBE4BO95155 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC23.78■■□□□ 1.4
UBE4BO95155 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC23.78■■□□□ 1.4
UBE4BO95155 MAG-206ENST00000597035 542 ntTSL 4 BASIC23.78■■□□□ 1.4
UBE4BO95155 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC23.78■■□□□ 1.4
UBE4BO95155 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC23.78■■□□□ 1.4
UBE4BO95155 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC23.78■■□□□ 1.4
UBE4BO95155 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC23.77■■□□□ 1.4
UBE4BO95155 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC23.77■■□□□ 1.4
UBE4BO95155 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
UBE4BO95155 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC23.77■■□□□ 1.4
UBE4BO95155 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
UBE4BO95155 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
UBE4BO95155 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
UBE4BO95155 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC23.77■■□□□ 1.4
UBE4BO95155 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
UBE4BO95155 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
UBE4BO95155 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC23.77■■□□□ 1.4
UBE4BO95155 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC23.77■■□□□ 1.4
UBE4BO95155 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
UBE4BO95155 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
UBE4BO95155 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.39
UBE4BO95155 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC23.77■■□□□ 1.39
UBE4BO95155 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
UBE4BO95155 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
UBE4BO95155 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC23.76■■□□□ 1.39
UBE4BO95155 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC23.76■■□□□ 1.39
UBE4BO95155 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
UBE4BO95155 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC23.76■■□□□ 1.39
UBE4BO95155 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
UBE4BO95155 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
UBE4BO95155 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
UBE4BO95155 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
UBE4BO95155 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
UBE4BO95155 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC23.76■■□□□ 1.39
UBE4BO95155 AL034346.1-201ENST00000568244 1277 ntBASIC23.76■■□□□ 1.39
UBE4BO95155 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC23.76■■□□□ 1.39
UBE4BO95155 AL136967.2-201ENST00000623968 743 ntBASIC23.76■■□□□ 1.39
UBE4BO95155 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC23.76■■□□□ 1.39
UBE4BO95155 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
UBE4BO95155 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
UBE4BO95155 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
UBE4BO95155 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
UBE4BO95155 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
UBE4BO95155 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
UBE4BO95155 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
UBE4BO95155 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
UBE4BO95155 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC23.75■■□□□ 1.39
UBE4BO95155 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC23.75■■□□□ 1.39
UBE4BO95155 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC23.74■■□□□ 1.39
UBE4BO95155 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC23.74■■□□□ 1.39
UBE4BO95155 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
UBE4BO95155 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC23.74■■□□□ 1.39
UBE4BO95155 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
UBE4BO95155 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
UBE4BO95155 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC23.74■■□□□ 1.39
UBE4BO95155 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
UBE4BO95155 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
UBE4BO95155 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
UBE4BO95155 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC23.74■■□□□ 1.39
UBE4BO95155 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
UBE4BO95155 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC23.73■■□□□ 1.39
UBE4BO95155 TSPY26P-201ENST00000476365 1326 ntBASIC23.73■■□□□ 1.39
UBE4BO95155 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
UBE4BO95155 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC23.73■■□□□ 1.39
UBE4BO95155 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
UBE4BO95155 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC23.73■■□□□ 1.39
UBE4BO95155 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC23.73■■□□□ 1.39
UBE4BO95155 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC23.73■■□□□ 1.39
UBE4BO95155 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC23.73■■□□□ 1.39
UBE4BO95155 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
UBE4BO95155 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
UBE4BO95155 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
UBE4BO95155 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC23.72■■□□□ 1.39
UBE4BO95155 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC23.72■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 17.1 ms