Protein–RNA interactions for Protein: O75954

TSPAN9, Tetraspanin-9, humanhuman

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9O75954 AL136116.3-201ENST00000402907 1138 ntBASIC18.49■□□□□ 0.55
TSPAN9O75954 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
TSPAN9O75954 AL139246.5-201ENST00000606645 996 ntBASIC18.49■□□□□ 0.55
TSPAN9O75954 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
TSPAN9O75954 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
TSPAN9O75954 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC18.49■□□□□ 0.55
TSPAN9O75954 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
TSPAN9O75954 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC18.49■□□□□ 0.55
TSPAN9O75954 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
TSPAN9O75954 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
TSPAN9O75954 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC18.49■□□□□ 0.55
TSPAN9O75954 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC18.49■□□□□ 0.55
TSPAN9O75954 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC18.49■□□□□ 0.55
TSPAN9O75954 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TSPAN9O75954 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TSPAN9O75954 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TSPAN9O75954 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TSPAN9O75954 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
TSPAN9O75954 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC18.48■□□□□ 0.55
TSPAN9O75954 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC18.48■□□□□ 0.55
TSPAN9O75954 AC026471.1-201ENST00000564629 3026 ntBASIC18.48■□□□□ 0.55
TSPAN9O75954 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TSPAN9O75954 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
TSPAN9O75954 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TSPAN9O75954 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
TSPAN9O75954 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC18.48■□□□□ 0.55
TSPAN9O75954 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC18.48■□□□□ 0.55
TSPAN9O75954 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TSPAN9O75954 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TSPAN9O75954 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TSPAN9O75954 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC18.47■□□□□ 0.55
TSPAN9O75954 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TSPAN9O75954 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC18.47■□□□□ 0.55
TSPAN9O75954 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TSPAN9O75954 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
TSPAN9O75954 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC18.47■□□□□ 0.55
TSPAN9O75954 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TSPAN9O75954 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TSPAN9O75954 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
TSPAN9O75954 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
TSPAN9O75954 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC18.47■□□□□ 0.55
TSPAN9O75954 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TSPAN9O75954 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
TSPAN9O75954 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
TSPAN9O75954 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
TSPAN9O75954 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
TSPAN9O75954 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TSPAN9O75954 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
TSPAN9O75954 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TSPAN9O75954 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
TSPAN9O75954 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TSPAN9O75954 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TSPAN9O75954 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
TSPAN9O75954 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TSPAN9O75954 MIR638-201ENST00000385237 100 ntBASIC18.46■□□□□ 0.55
TSPAN9O75954 NALT1-201ENST00000429224 738 ntTSL 5 BASIC18.46■□□□□ 0.55
TSPAN9O75954 AK3-203ENST00000447596 705 ntTSL 2 BASIC18.46■□□□□ 0.55
TSPAN9O75954 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
TSPAN9O75954 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC18.46■□□□□ 0.55
TSPAN9O75954 MIR6722-201ENST00000617286 78 ntBASIC18.46■□□□□ 0.55
TSPAN9O75954 RALB-208ENST00000631312 311 ntTSL 5 BASIC18.46■□□□□ 0.55
TSPAN9O75954 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC18.46■□□□□ 0.55
TSPAN9O75954 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC18.46■□□□□ 0.55
TSPAN9O75954 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TSPAN9O75954 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
TSPAN9O75954 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
TSPAN9O75954 NFE2L3P1-201ENST00000588207 1959 ntBASIC18.46■□□□□ 0.55
TSPAN9O75954 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
TSPAN9O75954 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
TSPAN9O75954 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TSPAN9O75954 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
TSPAN9O75954 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TSPAN9O75954 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC18.45■□□□□ 0.54
TSPAN9O75954 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
TSPAN9O75954 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
TSPAN9O75954 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC18.45■□□□□ 0.54
TSPAN9O75954 CD72-202ENST00000378430 585 ntTSL 3 BASIC18.45■□□□□ 0.54
TSPAN9O75954 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC18.45■□□□□ 0.54
TSPAN9O75954 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC18.45■□□□□ 0.54
TSPAN9O75954 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC18.45■□□□□ 0.54
TSPAN9O75954 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC18.45■□□□□ 0.54
TSPAN9O75954 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC18.45■□□□□ 0.54
TSPAN9O75954 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
TSPAN9O75954 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC18.45■□□□□ 0.54
TSPAN9O75954 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC18.45■□□□□ 0.54
TSPAN9O75954 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
TSPAN9O75954 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
TSPAN9O75954 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
TSPAN9O75954 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC18.44■□□□□ 0.54
TSPAN9O75954 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC18.44■□□□□ 0.54
TSPAN9O75954 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TSPAN9O75954 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC18.44■□□□□ 0.54
TSPAN9O75954 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
TSPAN9O75954 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
TSPAN9O75954 TFPT-201ENST00000391757 774 ntTSL 5 BASIC18.44■□□□□ 0.54
TSPAN9O75954 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
TSPAN9O75954 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
TSPAN9O75954 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC18.44■□□□□ 0.54
TSPAN9O75954 SNX5-217ENST00000606557 1087 ntBASIC18.44■□□□□ 0.54
TSPAN9O75954 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms