Protein–RNA interactions for Protein: O75346

ZNF253, Zinc finger protein 253, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF253O75346 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC16.79■□□□□ 0.28
ZNF253O75346 AC087742.1-201ENST00000575880 1738 ntBASIC16.79■□□□□ 0.28
ZNF253O75346 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
ZNF253O75346 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
ZNF253O75346 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC16.78■□□□□ 0.28
ZNF253O75346 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
ZNF253O75346 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
ZNF253O75346 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
ZNF253O75346 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
ZNF253O75346 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
ZNF253O75346 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
ZNF253O75346 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
ZNF253O75346 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
ZNF253O75346 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
ZNF253O75346 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
ZNF253O75346 TK2-216ENST00000564917 1156 ntTSL 3 BASIC16.78■□□□□ 0.28
ZNF253O75346 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
ZNF253O75346 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
ZNF253O75346 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
ZNF253O75346 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
ZNF253O75346 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
ZNF253O75346 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
ZNF253O75346 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
ZNF253O75346 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
ZNF253O75346 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
ZNF253O75346 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
ZNF253O75346 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
ZNF253O75346 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
ZNF253O75346 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC16.77■□□□□ 0.28
ZNF253O75346 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
ZNF253O75346 YBX1P4-201ENST00000392794 808 ntBASIC16.77■□□□□ 0.28
ZNF253O75346 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC16.77■□□□□ 0.28
ZNF253O75346 AC009086.3-201ENST00000623486 1008 ntBASIC16.77■□□□□ 0.28
ZNF253O75346 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC16.77■□□□□ 0.28
ZNF253O75346 PALM-208ENST00000592155 2272 ntTSL 4 BASIC16.77■□□□□ 0.27
ZNF253O75346 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC16.77■□□□□ 0.27
ZNF253O75346 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC16.77■□□□□ 0.27
ZNF253O75346 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
ZNF253O75346 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.27
ZNF253O75346 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
ZNF253O75346 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
ZNF253O75346 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
ZNF253O75346 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC16.76■□□□□ 0.27
ZNF253O75346 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC16.76■□□□□ 0.27
ZNF253O75346 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
ZNF253O75346 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC16.76■□□□□ 0.27
ZNF253O75346 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
ZNF253O75346 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
ZNF253O75346 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
ZNF253O75346 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
ZNF253O75346 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
ZNF253O75346 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
ZNF253O75346 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
ZNF253O75346 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
ZNF253O75346 AC012354.3-201ENST00000623734 483 ntBASIC16.76■□□□□ 0.27
ZNF253O75346 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC16.76■□□□□ 0.27
ZNF253O75346 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
ZNF253O75346 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
ZNF253O75346 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
ZNF253O75346 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC16.76■□□□□ 0.27
ZNF253O75346 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
ZNF253O75346 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
ZNF253O75346 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
ZNF253O75346 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
ZNF253O75346 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
ZNF253O75346 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC16.75■□□□□ 0.27
ZNF253O75346 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
ZNF253O75346 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
ZNF253O75346 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
ZNF253O75346 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
ZNF253O75346 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
ZNF253O75346 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
ZNF253O75346 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
ZNF253O75346 AC103834.1-201ENST00000520383 144 ntBASIC16.75■□□□□ 0.27
ZNF253O75346 AC103724.3-201ENST00000564481 992 ntBASIC16.75■□□□□ 0.27
ZNF253O75346 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC16.75■□□□□ 0.27
ZNF253O75346 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC16.75■□□□□ 0.27
ZNF253O75346 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
ZNF253O75346 FBXW4P1-201ENST00000426721 2239 ntBASIC16.75■□□□□ 0.27
ZNF253O75346 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
ZNF253O75346 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC16.75■□□□□ 0.27
ZNF253O75346 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
ZNF253O75346 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
ZNF253O75346 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
ZNF253O75346 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
ZNF253O75346 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
ZNF253O75346 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
ZNF253O75346 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
ZNF253O75346 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
ZNF253O75346 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
ZNF253O75346 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
ZNF253O75346 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC16.74■□□□□ 0.27
ZNF253O75346 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
ZNF253O75346 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
ZNF253O75346 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
ZNF253O75346 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
ZNF253O75346 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
ZNF253O75346 SENP5-202ENST00000419026 973 ntTSL 3 BASIC16.74■□□□□ 0.27
ZNF253O75346 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC16.74■□□□□ 0.27
ZNF253O75346 DUX4L4-201ENST00000566884 1269 ntBASIC16.74■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms