Protein–RNA interactions for Protein: O75175

CNOT3, CCR4-NOT transcription complex subunit 3, humanhuman

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3O75175 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
CNOT3O75175 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CNOT3O75175 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC20.9■□□□□ 0.94
CNOT3O75175 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
CNOT3O75175 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC20.89■□□□□ 0.93
CNOT3O75175 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
CNOT3O75175 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CNOT3O75175 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CNOT3O75175 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CNOT3O75175 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
CNOT3O75175 OR2I1P-207ENST00000453522 948 ntBASIC20.89■□□□□ 0.93
CNOT3O75175 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
CNOT3O75175 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
CNOT3O75175 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CNOT3O75175 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC20.89■□□□□ 0.93
CNOT3O75175 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC20.89■□□□□ 0.93
CNOT3O75175 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
CNOT3O75175 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC20.88■□□□□ 0.93
CNOT3O75175 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CNOT3O75175 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CNOT3O75175 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC20.88■□□□□ 0.93
CNOT3O75175 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CNOT3O75175 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
CNOT3O75175 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CNOT3O75175 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC20.88■□□□□ 0.93
CNOT3O75175 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC20.88■□□□□ 0.93
CNOT3O75175 MIR5787-201ENST00000611784 55 ntBASIC20.88■□□□□ 0.93
CNOT3O75175 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
CNOT3O75175 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
CNOT3O75175 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CNOT3O75175 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
CNOT3O75175 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC20.88■□□□□ 0.93
CNOT3O75175 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
CNOT3O75175 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
CNOT3O75175 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CNOT3O75175 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CNOT3O75175 PLD4-205ENST00000553861 667 ntTSL 2 BASIC20.87■□□□□ 0.93
CNOT3O75175 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CNOT3O75175 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
CNOT3O75175 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
CNOT3O75175 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CNOT3O75175 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CNOT3O75175 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
CNOT3O75175 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC20.86■□□□□ 0.93
CNOT3O75175 IGHV3-19-201ENST00000521488 291 ntBASIC20.86■□□□□ 0.93
CNOT3O75175 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC20.86■□□□□ 0.93
CNOT3O75175 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC20.86■□□□□ 0.93
CNOT3O75175 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC20.86■□□□□ 0.93
CNOT3O75175 SP2-202ENST00000613139 908 ntTSL 5 BASIC20.86■□□□□ 0.93
CNOT3O75175 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC20.86■□□□□ 0.93
CNOT3O75175 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CNOT3O75175 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
CNOT3O75175 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
CNOT3O75175 EP400NL-214ENST00000641289 2402 ntBASIC20.86■□□□□ 0.93
CNOT3O75175 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CNOT3O75175 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC20.86■□□□□ 0.93
CNOT3O75175 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
CNOT3O75175 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC20.85■□□□□ 0.93
CNOT3O75175 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC20.85■□□□□ 0.93
CNOT3O75175 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CNOT3O75175 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CNOT3O75175 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC20.85■□□□□ 0.93
CNOT3O75175 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CNOT3O75175 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
CNOT3O75175 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC20.85■□□□□ 0.93
CNOT3O75175 ANKRD20A6P-201ENST00000618763 204 ntBASIC20.85■□□□□ 0.93
CNOT3O75175 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC20.85■□□□□ 0.93
CNOT3O75175 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CNOT3O75175 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CNOT3O75175 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CNOT3O75175 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC20.85■□□□□ 0.93
CNOT3O75175 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CNOT3O75175 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CNOT3O75175 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC20.84■□□□□ 0.93
CNOT3O75175 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC20.84■□□□□ 0.93
CNOT3O75175 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CNOT3O75175 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC20.84■□□□□ 0.93
CNOT3O75175 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CNOT3O75175 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
CNOT3O75175 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CNOT3O75175 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CNOT3O75175 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC20.84■□□□□ 0.93
CNOT3O75175 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CNOT3O75175 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CNOT3O75175 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CNOT3O75175 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
CNOT3O75175 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
CNOT3O75175 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
CNOT3O75175 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC20.83■□□□□ 0.93
CNOT3O75175 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CNOT3O75175 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
CNOT3O75175 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
CNOT3O75175 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC20.83■□□□□ 0.93
CNOT3O75175 AICDA-202ENST00000537228 667 ntTSL 5 BASIC20.83■□□□□ 0.93
CNOT3O75175 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
CNOT3O75175 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC20.83■□□□□ 0.93
CNOT3O75175 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC20.83■□□□□ 0.93
CNOT3O75175 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.92
CNOT3O75175 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
CNOT3O75175 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC20.83■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 14.2 ms