Protein–RNA interactions for Protein: O60568

PLOD3, Procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

Predictions only

Length 738 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3O60568 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
PLOD3O60568 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
PLOD3O60568 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
PLOD3O60568 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
PLOD3O60568 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
PLOD3O60568 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PLOD3O60568 AC135279.3-201ENST00000610945 1311 ntBASIC20.38■□□□□ 0.85
PLOD3O60568 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PLOD3O60568 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
PLOD3O60568 SNX3-202ENST00000349379 890 ntTSL 2 BASIC20.38■□□□□ 0.85
PLOD3O60568 RBM38-205ENST00000440234 686 ntTSL 2 BASIC20.38■□□□□ 0.85
PLOD3O60568 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC20.38■□□□□ 0.85
PLOD3O60568 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
PLOD3O60568 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PLOD3O60568 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
PLOD3O60568 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PLOD3O60568 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PLOD3O60568 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
PLOD3O60568 AC080038.3-201ENST00000623346 1952 ntBASIC20.37■□□□□ 0.85
PLOD3O60568 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
PLOD3O60568 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC20.37■□□□□ 0.85
PLOD3O60568 AC096631.2-201ENST00000436136 790 ntBASIC20.37■□□□□ 0.85
PLOD3O60568 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC20.37■□□□□ 0.85
PLOD3O60568 MIR4767-201ENST00000582827 78 ntBASIC20.37■□□□□ 0.85
PLOD3O60568 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
PLOD3O60568 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
PLOD3O60568 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
PLOD3O60568 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC20.37■□□□□ 0.85
PLOD3O60568 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC20.37■□□□□ 0.85
PLOD3O60568 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
PLOD3O60568 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
PLOD3O60568 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
PLOD3O60568 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC20.36■□□□□ 0.85
PLOD3O60568 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC20.36■□□□□ 0.85
PLOD3O60568 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC20.36■□□□□ 0.85
PLOD3O60568 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC20.36■□□□□ 0.85
PLOD3O60568 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
PLOD3O60568 SLC47A1P1-202ENST00000449666 945 ntBASIC20.36■□□□□ 0.85
PLOD3O60568 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC20.36■□□□□ 0.85
PLOD3O60568 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC20.36■□□□□ 0.85
PLOD3O60568 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC20.36■□□□□ 0.85
PLOD3O60568 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
PLOD3O60568 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PLOD3O60568 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PLOD3O60568 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PLOD3O60568 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
PLOD3O60568 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
PLOD3O60568 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
PLOD3O60568 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
PLOD3O60568 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PLOD3O60568 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC20.35■□□□□ 0.85
PLOD3O60568 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC20.35■□□□□ 0.85
PLOD3O60568 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PLOD3O60568 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PLOD3O60568 BX842568.3-201ENST00000418104 571 ntBASIC20.35■□□□□ 0.85
PLOD3O60568 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC20.35■□□□□ 0.85
PLOD3O60568 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
PLOD3O60568 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PLOD3O60568 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
PLOD3O60568 AC139530.1-201ENST00000575312 1977 ntBASIC20.35■□□□□ 0.85
PLOD3O60568 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
PLOD3O60568 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC20.34■□□□□ 0.85
PLOD3O60568 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
PLOD3O60568 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PLOD3O60568 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PLOD3O60568 AP005435.1-201ENST00000529293 1178 ntBASIC20.34■□□□□ 0.85
PLOD3O60568 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC20.34■□□□□ 0.85
PLOD3O60568 AC106739.1-201ENST00000617035 715 ntBASIC20.34■□□□□ 0.85
PLOD3O60568 AC087239.1-201ENST00000622671 572 ntBASIC20.34■□□□□ 0.85
PLOD3O60568 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PLOD3O60568 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC20.34■□□□□ 0.85
PLOD3O60568 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
PLOD3O60568 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC20.34■□□□□ 0.85
PLOD3O60568 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
PLOD3O60568 LSR-203ENST00000360798 1963 ntTSL 2 BASIC20.34■□□□□ 0.85
PLOD3O60568 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
PLOD3O60568 LINC00526-201ENST00000581067 1875 ntBASIC20.33■□□□□ 0.85
PLOD3O60568 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
PLOD3O60568 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC20.33■□□□□ 0.85
PLOD3O60568 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC20.33■□□□□ 0.85
PLOD3O60568 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC20.33■□□□□ 0.85
PLOD3O60568 AC110285.6-201ENST00000617652 491 ntBASIC20.33■□□□□ 0.85
PLOD3O60568 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
PLOD3O60568 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
PLOD3O60568 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC20.33■□□□□ 0.84
PLOD3O60568 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
PLOD3O60568 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
PLOD3O60568 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
PLOD3O60568 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC20.32■□□□□ 0.84
PLOD3O60568 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
PLOD3O60568 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
PLOD3O60568 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
PLOD3O60568 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
PLOD3O60568 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
PLOD3O60568 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
PLOD3O60568 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
PLOD3O60568 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC20.32■□□□□ 0.84
PLOD3O60568 PBX2P1-201ENST00000493219 1291 ntBASIC20.32■□□□□ 0.84
PLOD3O60568 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
PLOD3O60568 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC20.32■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms