Protein–RNA interactions for Protein: O60547

GMDS, GDP-mannose 4,6 dehydratase, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GMDSO60547 AC073130.3-201ENST00000624389 2278 ntBASIC19.08■□□□□ 0.64
GMDSO60547 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
GMDSO60547 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
GMDSO60547 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
GMDSO60547 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
GMDSO60547 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
GMDSO60547 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
GMDSO60547 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC19.07■□□□□ 0.64
GMDSO60547 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC19.07■□□□□ 0.64
GMDSO60547 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
GMDSO60547 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC19.07■□□□□ 0.64
GMDSO60547 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
GMDSO60547 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
GMDSO60547 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
GMDSO60547 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC19.07■□□□□ 0.64
GMDSO60547 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC19.07■□□□□ 0.64
GMDSO60547 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC19.07■□□□□ 0.64
GMDSO60547 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
GMDSO60547 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
GMDSO60547 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
GMDSO60547 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
GMDSO60547 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC19.07■□□□□ 0.64
GMDSO60547 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
GMDSO60547 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
GMDSO60547 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
GMDSO60547 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC19.06■□□□□ 0.64
GMDSO60547 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
GMDSO60547 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC19.06■□□□□ 0.64
GMDSO60547 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC19.06■□□□□ 0.64
GMDSO60547 SRR-208ENST00000576848 588 ntTSL 4 BASIC19.06■□□□□ 0.64
GMDSO60547 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC19.06■□□□□ 0.64
GMDSO60547 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
GMDSO60547 NKILA-201ENST00000613231 537 ntTSL 4 BASIC19.06■□□□□ 0.64
GMDSO60547 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC19.06■□□□□ 0.64
GMDSO60547 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
GMDSO60547 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
GMDSO60547 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC19.06■□□□□ 0.64
GMDSO60547 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
GMDSO60547 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC19.06■□□□□ 0.64
GMDSO60547 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC19.05■□□□□ 0.64
GMDSO60547 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
GMDSO60547 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC19.05■□□□□ 0.64
GMDSO60547 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
GMDSO60547 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
GMDSO60547 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
GMDSO60547 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC19.05■□□□□ 0.64
GMDSO60547 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC19.05■□□□□ 0.64
GMDSO60547 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
GMDSO60547 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC19.05■□□□□ 0.64
GMDSO60547 PALM-208ENST00000592155 2272 ntTSL 4 BASIC19.05■□□□□ 0.64
GMDSO60547 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
GMDSO60547 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
GMDSO60547 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
GMDSO60547 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
GMDSO60547 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
GMDSO60547 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
GMDSO60547 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
GMDSO60547 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC19.04■□□□□ 0.64
GMDSO60547 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
GMDSO60547 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
GMDSO60547 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
GMDSO60547 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC19.04■□□□□ 0.64
GMDSO60547 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
GMDSO60547 RPP21-222ENST00000433076 577 ntTSL 2 BASIC19.04■□□□□ 0.64
GMDSO60547 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
GMDSO60547 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC19.04■□□□□ 0.64
GMDSO60547 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC19.04■□□□□ 0.64
GMDSO60547 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
GMDSO60547 DUX4L4-201ENST00000566884 1269 ntBASIC19.04■□□□□ 0.64
GMDSO60547 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
GMDSO60547 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC19.04■□□□□ 0.64
GMDSO60547 AC241377.3-202ENST00000626088 1088 ntBASIC19.04■□□□□ 0.64
GMDSO60547 AC241585.3-202ENST00000628937 1088 ntBASIC19.04■□□□□ 0.64
GMDSO60547 AC245100.8-202ENST00000629247 1058 ntBASIC19.04■□□□□ 0.64
GMDSO60547 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC19.04■□□□□ 0.64
GMDSO60547 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
GMDSO60547 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
GMDSO60547 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
GMDSO60547 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
GMDSO60547 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
GMDSO60547 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
GMDSO60547 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC19.03■□□□□ 0.64
GMDSO60547 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
GMDSO60547 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
GMDSO60547 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC19.03■□□□□ 0.64
GMDSO60547 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC19.03■□□□□ 0.64
GMDSO60547 VGF-203ENST00000611537 1622 ntTSL 5 BASIC19.03■□□□□ 0.64
GMDSO60547 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC19.03■□□□□ 0.64
GMDSO60547 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
GMDSO60547 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
GMDSO60547 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
GMDSO60547 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
GMDSO60547 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
GMDSO60547 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
GMDSO60547 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
GMDSO60547 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
GMDSO60547 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC19.02■□□□□ 0.64
GMDSO60547 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC19.02■□□□□ 0.64
GMDSO60547 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
GMDSO60547 AC080038.3-201ENST00000623346 1952 ntBASIC19.02■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms