Protein–RNA interactions for Protein: O60494

CUBN, Cubilin, humanhuman

Predictions only

Length 3,623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUBNO60494 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC17.53■□□□□ 0.4
CUBNO60494 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC17.53■□□□□ 0.4
CUBNO60494 PPP1R14BP2-201ENST00000426284 444 ntBASIC17.53■□□□□ 0.4
CUBNO60494 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC17.53■□□□□ 0.4
CUBNO60494 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC17.53■□□□□ 0.4
CUBNO60494 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC17.53■□□□□ 0.4
CUBNO60494 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC17.53■□□□□ 0.4
CUBNO60494 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CUBNO60494 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CUBNO60494 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC17.52■□□□□ 0.4
CUBNO60494 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC17.52■□□□□ 0.4
CUBNO60494 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC17.52■□□□□ 0.4
CUBNO60494 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC17.52■□□□□ 0.4
CUBNO60494 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
CUBNO60494 AC004812.2-201ENST00000611079 2094 ntBASIC17.52■□□□□ 0.4
CUBNO60494 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CUBNO60494 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
CUBNO60494 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.39
CUBNO60494 RHEB-204ENST00000472642 900 ntTSL 3 BASIC17.52■□□□□ 0.39
CUBNO60494 AC079140.4-201ENST00000507448 529 ntBASIC17.52■□□□□ 0.39
CUBNO60494 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC17.52■□□□□ 0.39
CUBNO60494 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CUBNO60494 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CUBNO60494 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CUBNO60494 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CUBNO60494 RARRES2P4-201ENST00000514074 484 ntBASIC17.51■□□□□ 0.39
CUBNO60494 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CUBNO60494 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CUBNO60494 PARP1-202ENST00000366792 553 ntTSL 3 BASIC17.51■□□□□ 0.39
CUBNO60494 AC133552.2-202ENST00000575694 574 ntBASIC17.51■□□□□ 0.39
CUBNO60494 MYC-209ENST00000641252 345 ntBASIC17.51■□□□□ 0.39
CUBNO60494 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CUBNO60494 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CUBNO60494 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC17.51■□□□□ 0.39
CUBNO60494 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC17.51■□□□□ 0.39
CUBNO60494 AL353803.4-201ENST00000565882 1934 ntBASIC17.5■□□□□ 0.39
CUBNO60494 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
CUBNO60494 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CUBNO60494 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CUBNO60494 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CUBNO60494 ECEL1P3-201ENST00000427961 737 ntBASIC17.5■□□□□ 0.39
CUBNO60494 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC17.5■□□□□ 0.39
CUBNO60494 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC17.5■□□□□ 0.39
CUBNO60494 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CUBNO60494 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CUBNO60494 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC17.5■□□□□ 0.39
CUBNO60494 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
CUBNO60494 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC17.5■□□□□ 0.39
CUBNO60494 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
CUBNO60494 H19-210ENST00000439725 1929 ntTSL 2 BASIC17.5■□□□□ 0.39
CUBNO60494 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
CUBNO60494 MFF-207ENST00000409565 1548 ntTSL 2 BASIC17.5■□□□□ 0.39
CUBNO60494 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CUBNO60494 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
CUBNO60494 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
CUBNO60494 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CUBNO60494 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CUBNO60494 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CUBNO60494 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC17.49■□□□□ 0.39
CUBNO60494 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC17.49■□□□□ 0.39
CUBNO60494 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CUBNO60494 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC17.49■□□□□ 0.39
CUBNO60494 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
CUBNO60494 BRI3-207ENST00000539286 699 ntTSL 2 BASIC17.49■□□□□ 0.39
CUBNO60494 MAX-217ENST00000557277 728 ntTSL 3 BASIC17.49■□□□□ 0.39
CUBNO60494 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC17.49■□□□□ 0.39
CUBNO60494 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
CUBNO60494 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CUBNO60494 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC17.49■□□□□ 0.39
CUBNO60494 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC17.49■□□□□ 0.39
CUBNO60494 AP006294.2-201ENST00000641667 209 ntBASIC17.49■□□□□ 0.39
CUBNO60494 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CUBNO60494 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC17.48■□□□□ 0.39
CUBNO60494 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CUBNO60494 LINC00543-201ENST00000567234 1845 ntBASIC17.48■□□□□ 0.39
CUBNO60494 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC17.48■□□□□ 0.39
CUBNO60494 MKRN4P-201ENST00000444706 1521 ntBASIC17.48■□□□□ 0.39
CUBNO60494 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
CUBNO60494 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC17.48■□□□□ 0.39
CUBNO60494 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC17.48■□□□□ 0.39
CUBNO60494 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CUBNO60494 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CUBNO60494 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CUBNO60494 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CUBNO60494 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC17.47■□□□□ 0.39
CUBNO60494 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC17.47■□□□□ 0.39
CUBNO60494 ABCB10P4-201ENST00000566803 2184 ntBASIC17.47■□□□□ 0.39
CUBNO60494 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CUBNO60494 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CUBNO60494 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC17.47■□□□□ 0.39
CUBNO60494 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC17.47■□□□□ 0.39
CUBNO60494 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC17.47■□□□□ 0.39
CUBNO60494 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CUBNO60494 UNC93B4-201ENST00000505679 747 ntBASIC17.47■□□□□ 0.39
CUBNO60494 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC17.47■□□□□ 0.39
CUBNO60494 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
CUBNO60494 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CUBNO60494 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
CUBNO60494 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
CUBNO60494 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC17.47■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms