Protein–RNA interactions for Protein: O60343

TBC1D4, TBC1 domain family member 4, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D4O60343 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC23.03■■□□□ 1.28
TBC1D4O60343 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC23.03■■□□□ 1.28
TBC1D4O60343 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC23.03■■□□□ 1.28
TBC1D4O60343 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC23.03■■□□□ 1.28
TBC1D4O60343 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC23.03■■□□□ 1.28
TBC1D4O60343 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
TBC1D4O60343 AC005224.4-201ENST00000583262 1652 ntBASIC23.03■■□□□ 1.28
TBC1D4O60343 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC23.03■■□□□ 1.28
TBC1D4O60343 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
TBC1D4O60343 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC23.02■■□□□ 1.28
TBC1D4O60343 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
TBC1D4O60343 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC23.02■■□□□ 1.28
TBC1D4O60343 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
TBC1D4O60343 HSCB-202ENST00000398941 955 ntTSL 2 BASIC23.02■■□□□ 1.28
TBC1D4O60343 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC23.02■■□□□ 1.28
TBC1D4O60343 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC23.02■■□□□ 1.28
TBC1D4O60343 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC23.02■■□□□ 1.28
TBC1D4O60343 LINC01960-201ENST00000563759 1884 ntBASIC23.02■■□□□ 1.28
TBC1D4O60343 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC23.02■■□□□ 1.28
TBC1D4O60343 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC23.01■■□□□ 1.27
TBC1D4O60343 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC23.01■■□□□ 1.27
TBC1D4O60343 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC23.01■■□□□ 1.27
TBC1D4O60343 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
TBC1D4O60343 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC23.01■■□□□ 1.27
TBC1D4O60343 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC23.01■■□□□ 1.27
TBC1D4O60343 AC079089.2-201ENST00000531211 1277 ntBASIC23.01■■□□□ 1.27
TBC1D4O60343 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC23.01■■□□□ 1.27
TBC1D4O60343 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC23.01■■□□□ 1.27
TBC1D4O60343 AC009237.3-201ENST00000393279 1427 ntBASIC23■■□□□ 1.27
TBC1D4O60343 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC23■■□□□ 1.27
TBC1D4O60343 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
TBC1D4O60343 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC23■■□□□ 1.27
TBC1D4O60343 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC23■■□□□ 1.27
TBC1D4O60343 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
TBC1D4O60343 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
TBC1D4O60343 DBI-210ENST00000542275 757 ntTSL 5 BASIC23■■□□□ 1.27
TBC1D4O60343 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC23■■□□□ 1.27
TBC1D4O60343 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC23■■□□□ 1.27
TBC1D4O60343 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC23■■□□□ 1.27
TBC1D4O60343 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC23■■□□□ 1.27
TBC1D4O60343 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
TBC1D4O60343 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC22.99■■□□□ 1.27
TBC1D4O60343 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC22.99■■□□□ 1.27
TBC1D4O60343 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
TBC1D4O60343 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC22.99■■□□□ 1.27
TBC1D4O60343 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC22.99■■□□□ 1.27
TBC1D4O60343 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC22.99■■□□□ 1.27
TBC1D4O60343 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
TBC1D4O60343 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC22.99■■□□□ 1.27
TBC1D4O60343 AC137761.2-201ENST00000561729 223 ntBASIC22.99■■□□□ 1.27
TBC1D4O60343 AC145350.3-201ENST00000569033 163 ntBASIC22.99■■□□□ 1.27
TBC1D4O60343 RAP2CP1-201ENST00000605103 478 ntBASIC22.99■■□□□ 1.27
TBC1D4O60343 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
TBC1D4O60343 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC22.99■■□□□ 1.27
TBC1D4O60343 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
TBC1D4O60343 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
TBC1D4O60343 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
TBC1D4O60343 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC22.98■■□□□ 1.27
TBC1D4O60343 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
TBC1D4O60343 KRT19P1-201ENST00000405746 1186 ntBASIC22.98■■□□□ 1.27
TBC1D4O60343 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC22.98■■□□□ 1.27
TBC1D4O60343 AC079140.4-201ENST00000507448 529 ntBASIC22.98■■□□□ 1.27
TBC1D4O60343 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC22.98■■□□□ 1.27
TBC1D4O60343 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
TBC1D4O60343 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
TBC1D4O60343 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC22.98■■□□□ 1.27
TBC1D4O60343 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC22.98■■□□□ 1.27
TBC1D4O60343 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC22.98■■□□□ 1.27
TBC1D4O60343 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
TBC1D4O60343 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
TBC1D4O60343 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC22.97■■□□□ 1.27
TBC1D4O60343 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC22.97■■□□□ 1.27
TBC1D4O60343 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC22.97■■□□□ 1.27
TBC1D4O60343 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC22.97■■□□□ 1.27
TBC1D4O60343 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC22.97■■□□□ 1.27
TBC1D4O60343 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC22.97■■□□□ 1.27
TBC1D4O60343 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
TBC1D4O60343 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC22.97■■□□□ 1.27
TBC1D4O60343 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
TBC1D4O60343 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC22.97■■□□□ 1.27
TBC1D4O60343 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
TBC1D4O60343 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
TBC1D4O60343 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC22.96■■□□□ 1.27
TBC1D4O60343 TESC-206ENST00000541210 936 ntTSL 3 BASIC22.96■■□□□ 1.27
TBC1D4O60343 AC080038.1-201ENST00000611274 1154 ntBASIC22.96■■□□□ 1.27
TBC1D4O60343 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
TBC1D4O60343 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC22.96■■□□□ 1.27
TBC1D4O60343 PXK-203ENST00000383715 1756 ntTSL 5 BASIC22.96■■□□□ 1.27
TBC1D4O60343 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
TBC1D4O60343 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
TBC1D4O60343 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
TBC1D4O60343 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC22.95■■□□□ 1.26
TBC1D4O60343 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC22.95■■□□□ 1.26
TBC1D4O60343 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC22.95■■□□□ 1.26
TBC1D4O60343 GAS2L1P2-201ENST00000436355 1356 ntBASIC22.95■■□□□ 1.26
TBC1D4O60343 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC22.95■■□□□ 1.26
TBC1D4O60343 WWOX-218ENST00000627394 894 ntTSL 5 BASIC22.95■■□□□ 1.26
TBC1D4O60343 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
TBC1D4O60343 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
TBC1D4O60343 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms