Protein–RNA interactions for Protein: O60287

URB1, Nucleolar pre-ribosomal-associated protein 1, humanhuman

Known RBP Predictions only

Length 2,271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
URB1O60287 RHEB-204ENST00000472642 900 ntTSL 3 BASIC20.51■□□□□ 0.87
URB1O60287 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC20.51■□□□□ 0.87
URB1O60287 PPP1R14BP2-201ENST00000426284 444 ntBASIC20.5■□□□□ 0.87
URB1O60287 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC20.5■□□□□ 0.87
URB1O60287 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
URB1O60287 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC20.5■□□□□ 0.87
URB1O60287 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
URB1O60287 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
URB1O60287 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
URB1O60287 EI24-211ENST00000534546 1544 ntTSL 2 BASIC20.5■□□□□ 0.87
URB1O60287 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC20.5■□□□□ 0.87
URB1O60287 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
URB1O60287 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
URB1O60287 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC20.49■□□□□ 0.87
URB1O60287 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
URB1O60287 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
URB1O60287 ASL-203ENST00000380839 1765 ntTSL 5 BASIC20.49■□□□□ 0.87
URB1O60287 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC20.49■□□□□ 0.87
URB1O60287 AL158047.1-201ENST00000445918 881 ntBASIC20.48■□□□□ 0.87
URB1O60287 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC20.48■□□□□ 0.87
URB1O60287 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC20.48■□□□□ 0.87
URB1O60287 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
URB1O60287 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
URB1O60287 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
URB1O60287 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC20.48■□□□□ 0.87
URB1O60287 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC20.48■□□□□ 0.87
URB1O60287 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC20.48■□□□□ 0.87
URB1O60287 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
URB1O60287 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
URB1O60287 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
URB1O60287 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
URB1O60287 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
URB1O60287 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
URB1O60287 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC20.47■□□□□ 0.87
URB1O60287 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC20.47■□□□□ 0.87
URB1O60287 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
URB1O60287 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
URB1O60287 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
URB1O60287 RPS2P4-201ENST00000476944 856 ntBASIC20.47■□□□□ 0.87
URB1O60287 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
URB1O60287 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
URB1O60287 MKRN4P-201ENST00000444706 1521 ntBASIC20.47■□□□□ 0.87
URB1O60287 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC20.47■□□□□ 0.87
URB1O60287 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
URB1O60287 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC20.47■□□□□ 0.87
URB1O60287 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
URB1O60287 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
URB1O60287 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC20.46■□□□□ 0.87
URB1O60287 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
URB1O60287 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC20.46■□□□□ 0.87
URB1O60287 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC20.46■□□□□ 0.87
URB1O60287 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
URB1O60287 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
URB1O60287 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
URB1O60287 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
URB1O60287 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC20.46■□□□□ 0.87
URB1O60287 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
URB1O60287 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
URB1O60287 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
URB1O60287 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
URB1O60287 ESRRAP1-201ENST00000400596 1257 ntBASIC20.46■□□□□ 0.87
URB1O60287 BRI3-207ENST00000539286 699 ntTSL 2 BASIC20.46■□□□□ 0.87
URB1O60287 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
URB1O60287 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC20.45■□□□□ 0.86
URB1O60287 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC20.45■□□□□ 0.86
URB1O60287 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
URB1O60287 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
URB1O60287 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
URB1O60287 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC20.45■□□□□ 0.86
URB1O60287 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC20.45■□□□□ 0.86
URB1O60287 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC20.45■□□□□ 0.86
URB1O60287 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
URB1O60287 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
URB1O60287 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
URB1O60287 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
URB1O60287 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC20.45■□□□□ 0.86
URB1O60287 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
URB1O60287 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
URB1O60287 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
URB1O60287 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC20.44■□□□□ 0.86
URB1O60287 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
URB1O60287 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC20.44■□□□□ 0.86
URB1O60287 AC005224.4-201ENST00000583262 1652 ntBASIC20.44■□□□□ 0.86
URB1O60287 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
URB1O60287 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
URB1O60287 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
URB1O60287 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
URB1O60287 BAALC-201ENST00000297574 801 ntTSL 3 BASIC20.44■□□□□ 0.86
URB1O60287 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
URB1O60287 CBFB-203ENST00000561924 584 ntTSL 5 BASIC20.44■□□□□ 0.86
URB1O60287 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC20.44■□□□□ 0.86
URB1O60287 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
URB1O60287 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC20.44■□□□□ 0.86
URB1O60287 AC083880.1-201ENST00000608266 535 ntBASIC20.44■□□□□ 0.86
URB1O60287 AC092118.2-201ENST00000613495 667 ntBASIC20.44■□□□□ 0.86
URB1O60287 AC068587.7-201ENST00000641602 218 ntBASIC20.44■□□□□ 0.86
URB1O60287 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
URB1O60287 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
URB1O60287 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
URB1O60287 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms