Protein–RNA interactions for Protein: O43181

NDUFS4, NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial, humanhuman

Predictions only

Length 175 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS4O43181 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC20.78■□□□□ 0.92
NDUFS4O43181 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
NDUFS4O43181 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
NDUFS4O43181 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC20.78■□□□□ 0.92
NDUFS4O43181 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
NDUFS4O43181 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
NDUFS4O43181 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
NDUFS4O43181 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC20.77■□□□□ 0.92
NDUFS4O43181 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
NDUFS4O43181 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
NDUFS4O43181 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
NDUFS4O43181 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC20.77■□□□□ 0.92
NDUFS4O43181 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC20.77■□□□□ 0.92
NDUFS4O43181 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC20.77■□□□□ 0.92
NDUFS4O43181 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
NDUFS4O43181 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
NDUFS4O43181 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
NDUFS4O43181 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
NDUFS4O43181 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
NDUFS4O43181 LSR-203ENST00000360798 1963 ntTSL 2 BASIC20.77■□□□□ 0.92
NDUFS4O43181 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
NDUFS4O43181 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
NDUFS4O43181 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
NDUFS4O43181 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC20.76■□□□□ 0.91
NDUFS4O43181 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
NDUFS4O43181 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
NDUFS4O43181 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
NDUFS4O43181 LINC00526-201ENST00000581067 1875 ntBASIC20.76■□□□□ 0.91
NDUFS4O43181 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC20.76■□□□□ 0.91
NDUFS4O43181 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
NDUFS4O43181 OXCT2P1-201ENST00000447263 1535 ntBASIC20.76■□□□□ 0.91
NDUFS4O43181 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
NDUFS4O43181 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
NDUFS4O43181 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
NDUFS4O43181 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
NDUFS4O43181 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC20.76■□□□□ 0.91
NDUFS4O43181 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
NDUFS4O43181 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
NDUFS4O43181 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
NDUFS4O43181 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
NDUFS4O43181 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
NDUFS4O43181 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC20.75■□□□□ 0.91
NDUFS4O43181 EP400NL-214ENST00000641289 2402 ntBASIC20.75■□□□□ 0.91
NDUFS4O43181 AC079834.2-201ENST00000609776 1949 ntBASIC20.75■□□□□ 0.91
NDUFS4O43181 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
NDUFS4O43181 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC20.75■□□□□ 0.91
NDUFS4O43181 EBPL-204ENST00000378272 766 ntTSL 3 BASIC20.75■□□□□ 0.91
NDUFS4O43181 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
NDUFS4O43181 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC20.75■□□□□ 0.91
NDUFS4O43181 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC20.75■□□□□ 0.91
NDUFS4O43181 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC20.75■□□□□ 0.91
NDUFS4O43181 AC105265.2-201ENST00000467189 838 ntBASIC20.75■□□□□ 0.91
NDUFS4O43181 STOX2-205ENST00000513034 807 ntTSL 3 BASIC20.75■□□□□ 0.91
NDUFS4O43181 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC20.75■□□□□ 0.91
NDUFS4O43181 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
NDUFS4O43181 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC20.75■□□□□ 0.91
NDUFS4O43181 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC20.74■□□□□ 0.91
NDUFS4O43181 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
NDUFS4O43181 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
NDUFS4O43181 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
NDUFS4O43181 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
NDUFS4O43181 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
NDUFS4O43181 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
NDUFS4O43181 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
NDUFS4O43181 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
NDUFS4O43181 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
NDUFS4O43181 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC20.73■□□□□ 0.91
NDUFS4O43181 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
NDUFS4O43181 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
NDUFS4O43181 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC20.73■□□□□ 0.91
NDUFS4O43181 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC20.73■□□□□ 0.91
NDUFS4O43181 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
NDUFS4O43181 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
NDUFS4O43181 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
NDUFS4O43181 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
NDUFS4O43181 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
NDUFS4O43181 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC20.73■□□□□ 0.91
NDUFS4O43181 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC20.73■□□□□ 0.91
NDUFS4O43181 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
NDUFS4O43181 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
NDUFS4O43181 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
NDUFS4O43181 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC20.73■□□□□ 0.91
NDUFS4O43181 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC20.73■□□□□ 0.91
NDUFS4O43181 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC20.73■□□□□ 0.91
NDUFS4O43181 AC079089.2-201ENST00000531211 1277 ntBASIC20.73■□□□□ 0.91
NDUFS4O43181 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC20.73■□□□□ 0.91
NDUFS4O43181 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
NDUFS4O43181 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
NDUFS4O43181 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC20.73■□□□□ 0.91
NDUFS4O43181 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
NDUFS4O43181 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
NDUFS4O43181 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
NDUFS4O43181 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC20.72■□□□□ 0.91
NDUFS4O43181 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
NDUFS4O43181 AC092053.2-201ENST00000640557 1818 ntBASIC20.72■□□□□ 0.91
NDUFS4O43181 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
NDUFS4O43181 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
NDUFS4O43181 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC20.72■□□□□ 0.91
NDUFS4O43181 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
NDUFS4O43181 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 61 ms