Protein–RNA interactions for Protein: O00299

CLIC1, Chloride intracellular channel protein 1, humanhuman

Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC1O00299 AC244015.2-201ENST00000616358 1861 ntBASIC20.43■□□□□ 0.86
CLIC1O00299 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CLIC1O00299 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CLIC1O00299 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC20.43■□□□□ 0.86
CLIC1O00299 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CLIC1O00299 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
CLIC1O00299 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC20.43■□□□□ 0.86
CLIC1O00299 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
CLIC1O00299 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CLIC1O00299 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
CLIC1O00299 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
CLIC1O00299 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
CLIC1O00299 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CLIC1O00299 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CLIC1O00299 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC20.42■□□□□ 0.86
CLIC1O00299 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CLIC1O00299 AC241377.3-202ENST00000626088 1088 ntBASIC20.42■□□□□ 0.86
CLIC1O00299 AC241585.3-202ENST00000628937 1088 ntBASIC20.42■□□□□ 0.86
CLIC1O00299 AC245100.8-202ENST00000629247 1058 ntBASIC20.42■□□□□ 0.86
CLIC1O00299 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC20.42■□□□□ 0.86
CLIC1O00299 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CLIC1O00299 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CLIC1O00299 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC20.42■□□□□ 0.86
CLIC1O00299 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CLIC1O00299 GTSE1-AS1-202ENST00000623117 1518 ntBASIC20.42■□□□□ 0.86
CLIC1O00299 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CLIC1O00299 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
CLIC1O00299 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CLIC1O00299 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CLIC1O00299 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
CLIC1O00299 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
CLIC1O00299 UNC93B8-201ENST00000511903 705 ntBASIC20.41■□□□□ 0.86
CLIC1O00299 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC20.41■□□□□ 0.86
CLIC1O00299 AL451085.2-201ENST00000605085 799 ntBASIC20.41■□□□□ 0.86
CLIC1O00299 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CLIC1O00299 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC20.41■□□□□ 0.86
CLIC1O00299 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC20.41■□□□□ 0.86
CLIC1O00299 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CLIC1O00299 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC20.41■□□□□ 0.86
CLIC1O00299 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CLIC1O00299 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CLIC1O00299 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CLIC1O00299 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CLIC1O00299 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CLIC1O00299 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CLIC1O00299 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
CLIC1O00299 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
CLIC1O00299 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
CLIC1O00299 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
CLIC1O00299 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
CLIC1O00299 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CLIC1O00299 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC20.4■□□□□ 0.86
CLIC1O00299 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC20.4■□□□□ 0.86
CLIC1O00299 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CLIC1O00299 ME2-206ENST00000638410 2289 ntTSL 5 BASIC20.39■□□□□ 0.86
CLIC1O00299 ME2-210ENST00000639255 2262 ntTSL 5 BASIC20.39■□□□□ 0.86
CLIC1O00299 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.86
CLIC1O00299 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC20.39■□□□□ 0.86
CLIC1O00299 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
CLIC1O00299 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
CLIC1O00299 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC20.39■□□□□ 0.86
CLIC1O00299 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC20.39■□□□□ 0.85
CLIC1O00299 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC20.39■□□□□ 0.85
CLIC1O00299 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC20.39■□□□□ 0.85
CLIC1O00299 CREM-229ENST00000474362 1030 ntTSL 2 BASIC20.39■□□□□ 0.85
CLIC1O00299 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC20.39■□□□□ 0.85
CLIC1O00299 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC20.39■□□□□ 0.85
CLIC1O00299 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CLIC1O00299 PALM-208ENST00000592155 2272 ntTSL 4 BASIC20.39■□□□□ 0.85
CLIC1O00299 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CLIC1O00299 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CLIC1O00299 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CLIC1O00299 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC20.38■□□□□ 0.85
CLIC1O00299 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC20.38■□□□□ 0.85
CLIC1O00299 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CLIC1O00299 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CLIC1O00299 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CLIC1O00299 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC20.38■□□□□ 0.85
CLIC1O00299 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC20.38■□□□□ 0.85
CLIC1O00299 AL031602.1-201ENST00000633169 911 ntBASIC20.38■□□□□ 0.85
CLIC1O00299 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
CLIC1O00299 AC133637.1-201ENST00000624115 1537 ntBASIC20.37■□□□□ 0.85
CLIC1O00299 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC20.37■□□□□ 0.85
CLIC1O00299 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
CLIC1O00299 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC20.37■□□□□ 0.85
CLIC1O00299 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
CLIC1O00299 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CLIC1O00299 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CLIC1O00299 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC20.37■□□□□ 0.85
CLIC1O00299 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC20.37■□□□□ 0.85
CLIC1O00299 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CLIC1O00299 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
CLIC1O00299 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CLIC1O00299 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CLIC1O00299 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
CLIC1O00299 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC20.37■□□□□ 0.85
CLIC1O00299 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC20.37■□□□□ 0.85
CLIC1O00299 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CLIC1O00299 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
CLIC1O00299 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC20.37■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms