Protein–RNA interactions for Protein: O00203

AP3B1, AP-3 complex subunit beta-1, humanhuman

Predictions only

Length 1,094 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3B1O00203 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
AP3B1O00203 PTCHD3P2-201ENST00000424937 1205 ntBASIC21.91■■□□□ 1.1
AP3B1O00203 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
AP3B1O00203 AC011298.3-201ENST00000615796 283 ntBASIC21.91■■□□□ 1.1
AP3B1O00203 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
AP3B1O00203 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
AP3B1O00203 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
AP3B1O00203 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC21.91■■□□□ 1.1
AP3B1O00203 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
AP3B1O00203 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
AP3B1O00203 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC21.9■■□□□ 1.1
AP3B1O00203 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC21.9■■□□□ 1.1
AP3B1O00203 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC21.9■■□□□ 1.1
AP3B1O00203 OR7E47P-201ENST00000546390 1422 ntBASIC21.9■■□□□ 1.1
AP3B1O00203 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
AP3B1O00203 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
AP3B1O00203 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
AP3B1O00203 AC010141.3-201ENST00000456659 717 ntBASIC21.9■■□□□ 1.1
AP3B1O00203 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC21.9■■□□□ 1.1
AP3B1O00203 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
AP3B1O00203 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC21.9■■□□□ 1.1
AP3B1O00203 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
AP3B1O00203 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
AP3B1O00203 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
AP3B1O00203 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
AP3B1O00203 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC21.89■■□□□ 1.09
AP3B1O00203 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC21.89■■□□□ 1.09
AP3B1O00203 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
AP3B1O00203 AC136469.2-201ENST00000623944 1028 ntBASIC21.89■■□□□ 1.09
AP3B1O00203 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC21.89■■□□□ 1.09
AP3B1O00203 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC21.89■■□□□ 1.09
AP3B1O00203 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
AP3B1O00203 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC21.89■■□□□ 1.09
AP3B1O00203 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC21.89■■□□□ 1.09
AP3B1O00203 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC21.89■■□□□ 1.09
AP3B1O00203 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
AP3B1O00203 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC21.88■■□□□ 1.09
AP3B1O00203 WWC2-AS2-201ENST00000578387 2183 ntBASIC21.88■■□□□ 1.09
AP3B1O00203 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
AP3B1O00203 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC21.88■■□□□ 1.09
AP3B1O00203 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC21.88■■□□□ 1.09
AP3B1O00203 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
AP3B1O00203 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC21.88■■□□□ 1.09
AP3B1O00203 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
AP3B1O00203 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
AP3B1O00203 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
AP3B1O00203 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
AP3B1O00203 TRIR-202ENST00000588213 841 ntTSL 3 BASIC21.88■■□□□ 1.09
AP3B1O00203 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
AP3B1O00203 GOLGA2P6-201ENST00000340929 2049 ntBASIC21.88■■□□□ 1.09
AP3B1O00203 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
AP3B1O00203 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
AP3B1O00203 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
AP3B1O00203 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC21.87■■□□□ 1.09
AP3B1O00203 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC21.87■■□□□ 1.09
AP3B1O00203 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
AP3B1O00203 SERBP1P1-201ENST00000396021 1160 ntBASIC21.87■■□□□ 1.09
AP3B1O00203 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC21.87■■□□□ 1.09
AP3B1O00203 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC21.87■■□□□ 1.09
AP3B1O00203 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC21.87■■□□□ 1.09
AP3B1O00203 MIR4466-201ENST00000606121 54 ntBASIC21.87■■□□□ 1.09
AP3B1O00203 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC21.87■■□□□ 1.09
AP3B1O00203 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
AP3B1O00203 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC21.87■■□□□ 1.09
AP3B1O00203 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
AP3B1O00203 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC21.86■■□□□ 1.09
AP3B1O00203 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
AP3B1O00203 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC21.86■■□□□ 1.09
AP3B1O00203 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
AP3B1O00203 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
AP3B1O00203 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
AP3B1O00203 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
AP3B1O00203 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
AP3B1O00203 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC21.86■■□□□ 1.09
AP3B1O00203 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC21.86■■□□□ 1.09
AP3B1O00203 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
AP3B1O00203 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC21.86■■□□□ 1.09
AP3B1O00203 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
AP3B1O00203 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
AP3B1O00203 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC21.86■■□□□ 1.09
AP3B1O00203 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC21.85■■□□□ 1.09
AP3B1O00203 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
AP3B1O00203 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
AP3B1O00203 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
AP3B1O00203 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
AP3B1O00203 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
AP3B1O00203 AP005435.1-201ENST00000529293 1178 ntBASIC21.85■■□□□ 1.09
AP3B1O00203 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC21.85■■□□□ 1.09
AP3B1O00203 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC21.85■■□□□ 1.09
AP3B1O00203 FBXW4P1-201ENST00000426721 2239 ntBASIC21.85■■□□□ 1.09
AP3B1O00203 CLDN5-201ENST00000403084 2357 ntBASIC21.85■■□□□ 1.09
AP3B1O00203 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
AP3B1O00203 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC21.85■■□□□ 1.09
AP3B1O00203 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
AP3B1O00203 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC21.85■■□□□ 1.09
AP3B1O00203 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
AP3B1O00203 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
AP3B1O00203 OXCT2P1-201ENST00000447263 1535 ntBASIC21.85■■□□□ 1.09
AP3B1O00203 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
AP3B1O00203 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 10.4 ms