Protein–RNA interactions for Protein: H3BM21

Integrin beta (Fragment), humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3BM21 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC21.59■■□□□ 1.05
H3BM21 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC21.59■■□□□ 1.05
H3BM21 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC21.59■■□□□ 1.05
H3BM21 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC21.59■■□□□ 1.05
H3BM21 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
H3BM21 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
H3BM21 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC21.59■■□□□ 1.05
H3BM21 GCA-201ENST00000233612 1694 ntTSL 2 BASIC21.59■■□□□ 1.05
H3BM21 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
H3BM21 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC21.58■■□□□ 1.05
H3BM21 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC21.58■■□□□ 1.05
H3BM21 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
H3BM21 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC21.58■■□□□ 1.05
H3BM21 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
H3BM21 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC21.58■■□□□ 1.05
H3BM21 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC21.58■■□□□ 1.05
H3BM21 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
H3BM21 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.04
H3BM21 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC21.58■■□□□ 1.04
H3BM21 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
H3BM21 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
H3BM21 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
H3BM21 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
H3BM21 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
H3BM21 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
H3BM21 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
H3BM21 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC21.57■■□□□ 1.04
H3BM21 RARRES2P11-201ENST00000635158 484 ntBASIC21.57■■□□□ 1.04
H3BM21 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC21.57■■□□□ 1.04
H3BM21 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
H3BM21 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
H3BM21 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
H3BM21 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC21.57■■□□□ 1.04
H3BM21 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
H3BM21 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
H3BM21 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC21.56■■□□□ 1.04
H3BM21 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
H3BM21 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
H3BM21 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
H3BM21 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC21.56■■□□□ 1.04
H3BM21 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC21.56■■□□□ 1.04
H3BM21 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
H3BM21 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC21.56■■□□□ 1.04
H3BM21 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC21.56■■□□□ 1.04
H3BM21 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
H3BM21 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
H3BM21 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC21.56■■□□□ 1.04
H3BM21 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
H3BM21 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
H3BM21 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
H3BM21 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
H3BM21 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
H3BM21 EI24-211ENST00000534546 1544 ntTSL 2 BASIC21.55■■□□□ 1.04
H3BM21 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC21.55■■□□□ 1.04
H3BM21 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
H3BM21 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC21.55■■□□□ 1.04
H3BM21 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
H3BM21 AC010141.3-201ENST00000456659 717 ntBASIC21.55■■□□□ 1.04
H3BM21 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
H3BM21 AC090192.1-201ENST00000517740 490 ntBASIC21.55■■□□□ 1.04
H3BM21 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC21.55■■□□□ 1.04
H3BM21 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC21.55■■□□□ 1.04
H3BM21 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC21.55■■□□□ 1.04
H3BM21 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC21.55■■□□□ 1.04
H3BM21 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
H3BM21 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
H3BM21 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
H3BM21 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC21.55■■□□□ 1.04
H3BM21 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
H3BM21 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
H3BM21 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
H3BM21 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC21.54■■□□□ 1.04
H3BM21 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC21.54■■□□□ 1.04
H3BM21 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
H3BM21 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
H3BM21 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC21.54■■□□□ 1.04
H3BM21 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC21.54■■□□□ 1.04
H3BM21 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC21.54■■□□□ 1.04
H3BM21 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
H3BM21 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
H3BM21 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
H3BM21 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC21.54■■□□□ 1.04
H3BM21 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
H3BM21 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC21.53■■□□□ 1.04
H3BM21 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
H3BM21 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
H3BM21 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
H3BM21 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC21.53■■□□□ 1.04
H3BM21 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
H3BM21 COMT-203ENST00000403184 2217 ntTSL 2 BASIC21.53■■□□□ 1.04
H3BM21 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
H3BM21 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
H3BM21 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
H3BM21 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
H3BM21 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
H3BM21 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
H3BM21 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
H3BM21 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC21.52■■□□□ 1.04
H3BM21 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC21.52■■□□□ 1.04
H3BM21 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC21.52■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms