Protein–RNA interactions for Protein: A8MV65

VGLL3, Transcription cofactor vestigial-like protein 3, humanhuman

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL3A8MV65 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC21.19■□□□□ 0.98
VGLL3A8MV65 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
VGLL3A8MV65 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
VGLL3A8MV65 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
VGLL3A8MV65 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC21.19■□□□□ 0.98
VGLL3A8MV65 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC21.19■□□□□ 0.98
VGLL3A8MV65 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC21.18■□□□□ 0.98
VGLL3A8MV65 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
VGLL3A8MV65 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC21.18■□□□□ 0.98
VGLL3A8MV65 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
VGLL3A8MV65 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC21.18■□□□□ 0.98
VGLL3A8MV65 DUX4L29-201ENST00000425409 679 ntBASIC21.18■□□□□ 0.98
VGLL3A8MV65 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
VGLL3A8MV65 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
VGLL3A8MV65 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
VGLL3A8MV65 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC21.18■□□□□ 0.98
VGLL3A8MV65 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
VGLL3A8MV65 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC21.17■□□□□ 0.98
VGLL3A8MV65 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC21.17■□□□□ 0.98
VGLL3A8MV65 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
VGLL3A8MV65 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
VGLL3A8MV65 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
VGLL3A8MV65 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
VGLL3A8MV65 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC21.17■□□□□ 0.98
VGLL3A8MV65 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
VGLL3A8MV65 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
VGLL3A8MV65 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
VGLL3A8MV65 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC21.17■□□□□ 0.98
VGLL3A8MV65 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
VGLL3A8MV65 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC21.17■□□□□ 0.98
VGLL3A8MV65 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
VGLL3A8MV65 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
VGLL3A8MV65 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
VGLL3A8MV65 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
VGLL3A8MV65 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
VGLL3A8MV65 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC21.16■□□□□ 0.98
VGLL3A8MV65 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
VGLL3A8MV65 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC21.16■□□□□ 0.98
VGLL3A8MV65 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
VGLL3A8MV65 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
VGLL3A8MV65 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
VGLL3A8MV65 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
VGLL3A8MV65 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC21.16■□□□□ 0.98
VGLL3A8MV65 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
VGLL3A8MV65 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
VGLL3A8MV65 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC21.16■□□□□ 0.98
VGLL3A8MV65 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC21.16■□□□□ 0.98
VGLL3A8MV65 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
VGLL3A8MV65 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
VGLL3A8MV65 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
VGLL3A8MV65 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
VGLL3A8MV65 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC21.15■□□□□ 0.98
VGLL3A8MV65 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
VGLL3A8MV65 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
VGLL3A8MV65 HGH1-207ENST00000628266 258 ntTSL 5 BASIC21.15■□□□□ 0.98
VGLL3A8MV65 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
VGLL3A8MV65 AC080038.3-201ENST00000623346 1952 ntBASIC21.15■□□□□ 0.98
VGLL3A8MV65 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
VGLL3A8MV65 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
VGLL3A8MV65 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
VGLL3A8MV65 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC21.15■□□□□ 0.98
VGLL3A8MV65 AC092053.2-201ENST00000640557 1818 ntBASIC21.15■□□□□ 0.98
VGLL3A8MV65 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC21.15■□□□□ 0.98
VGLL3A8MV65 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
VGLL3A8MV65 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
VGLL3A8MV65 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
VGLL3A8MV65 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
VGLL3A8MV65 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC21.14■□□□□ 0.98
VGLL3A8MV65 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.98
VGLL3A8MV65 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.98
VGLL3A8MV65 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC21.14■□□□□ 0.98
VGLL3A8MV65 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC21.14■□□□□ 0.98
VGLL3A8MV65 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
VGLL3A8MV65 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
VGLL3A8MV65 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
VGLL3A8MV65 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC21.14■□□□□ 0.97
VGLL3A8MV65 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
VGLL3A8MV65 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
VGLL3A8MV65 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
VGLL3A8MV65 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
VGLL3A8MV65 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
VGLL3A8MV65 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
VGLL3A8MV65 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
VGLL3A8MV65 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
VGLL3A8MV65 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
VGLL3A8MV65 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
VGLL3A8MV65 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
VGLL3A8MV65 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
VGLL3A8MV65 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
VGLL3A8MV65 AL032819.2-201ENST00000624543 2162 ntBASIC21.13■□□□□ 0.97
VGLL3A8MV65 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC21.13■□□□□ 0.97
VGLL3A8MV65 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC21.13■□□□□ 0.97
VGLL3A8MV65 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC21.13■□□□□ 0.97
VGLL3A8MV65 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
VGLL3A8MV65 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
VGLL3A8MV65 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
VGLL3A8MV65 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
VGLL3A8MV65 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
VGLL3A8MV65 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC21.13■□□□□ 0.97
VGLL3A8MV65 AC020916.1-201ENST00000587762 1774 ntBASIC21.13■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 15 ms