Protein–RNA interactions for Protein: A0A5B7

TCRBV4S1A1T, T-cell receptor beta variable 29-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV4S1A1TA0A5B7 MPST-208ENST00000628507 698 ntTSL 5 BASIC17.4■□□□□ 0.38
TCRBV4S1A1TA0A5B7 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC17.4■□□□□ 0.38
TCRBV4S1A1TA0A5B7 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC17.4■□□□□ 0.38
TCRBV4S1A1TA0A5B7 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TCRBV4S1A1TA0A5B7 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TCRBV4S1A1TA0A5B7 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TCRBV4S1A1TA0A5B7 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
TCRBV4S1A1TA0A5B7 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TCRBV4S1A1TA0A5B7 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC17.4■□□□□ 0.38
TCRBV4S1A1TA0A5B7 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TCRBV4S1A1TA0A5B7 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TCRBV4S1A1TA0A5B7 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.38
TCRBV4S1A1TA0A5B7 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC17.39■□□□□ 0.38
TCRBV4S1A1TA0A5B7 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TCRBV4S1A1TA0A5B7 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
TCRBV4S1A1TA0A5B7 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
TCRBV4S1A1TA0A5B7 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC17.39■□□□□ 0.37
TCRBV4S1A1TA0A5B7 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TCRBV4S1A1TA0A5B7 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
TCRBV4S1A1TA0A5B7 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC17.39■□□□□ 0.37
TCRBV4S1A1TA0A5B7 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC17.39■□□□□ 0.37
TCRBV4S1A1TA0A5B7 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC17.39■□□□□ 0.37
TCRBV4S1A1TA0A5B7 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC17.39■□□□□ 0.37
TCRBV4S1A1TA0A5B7 FP325331.1-202ENST00000623531 1380 ntBASIC17.39■□□□□ 0.37
TCRBV4S1A1TA0A5B7 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
TCRBV4S1A1TA0A5B7 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
TCRBV4S1A1TA0A5B7 WWC2-AS2-201ENST00000578387 2183 ntBASIC17.38■□□□□ 0.37
TCRBV4S1A1TA0A5B7 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TCRBV4S1A1TA0A5B7 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
TCRBV4S1A1TA0A5B7 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
TCRBV4S1A1TA0A5B7 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TCRBV4S1A1TA0A5B7 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC17.38■□□□□ 0.37
TCRBV4S1A1TA0A5B7 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TCRBV4S1A1TA0A5B7 AC026271.2-201ENST00000428091 497 ntBASIC17.38■□□□□ 0.37
TCRBV4S1A1TA0A5B7 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC17.38■□□□□ 0.37
TCRBV4S1A1TA0A5B7 RHOF-204ENST00000537265 699 ntTSL 2 BASIC17.38■□□□□ 0.37
TCRBV4S1A1TA0A5B7 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TCRBV4S1A1TA0A5B7 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC17.38■□□□□ 0.37
TCRBV4S1A1TA0A5B7 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
TCRBV4S1A1TA0A5B7 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC17.38■□□□□ 0.37
TCRBV4S1A1TA0A5B7 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
TCRBV4S1A1TA0A5B7 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
TCRBV4S1A1TA0A5B7 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TCRBV4S1A1TA0A5B7 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TCRBV4S1A1TA0A5B7 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TCRBV4S1A1TA0A5B7 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TCRBV4S1A1TA0A5B7 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC17.37■□□□□ 0.37
TCRBV4S1A1TA0A5B7 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
TCRBV4S1A1TA0A5B7 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC17.37■□□□□ 0.37
TCRBV4S1A1TA0A5B7 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC17.37■□□□□ 0.37
TCRBV4S1A1TA0A5B7 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TCRBV4S1A1TA0A5B7 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC17.37■□□□□ 0.37
TCRBV4S1A1TA0A5B7 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
TCRBV4S1A1TA0A5B7 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC17.37■□□□□ 0.37
TCRBV4S1A1TA0A5B7 AC092053.2-201ENST00000640557 1818 ntBASIC17.37■□□□□ 0.37
TCRBV4S1A1TA0A5B7 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
TCRBV4S1A1TA0A5B7 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC17.37■□□□□ 0.37
TCRBV4S1A1TA0A5B7 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TCRBV4S1A1TA0A5B7 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TCRBV4S1A1TA0A5B7 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TCRBV4S1A1TA0A5B7 AC133637.1-201ENST00000624115 1537 ntBASIC17.37■□□□□ 0.37
TCRBV4S1A1TA0A5B7 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TCRBV4S1A1TA0A5B7 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TCRBV4S1A1TA0A5B7 SNX3-202ENST00000349379 890 ntTSL 2 BASIC17.36■□□□□ 0.37
TCRBV4S1A1TA0A5B7 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TCRBV4S1A1TA0A5B7 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC17.36■□□□□ 0.37
TCRBV4S1A1TA0A5B7 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TCRBV4S1A1TA0A5B7 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TCRBV4S1A1TA0A5B7 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TCRBV4S1A1TA0A5B7 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TCRBV4S1A1TA0A5B7 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TCRBV4S1A1TA0A5B7 AC144652.1-201ENST00000609974 1624 ntBASIC17.36■□□□□ 0.37
TCRBV4S1A1TA0A5B7 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC17.36■□□□□ 0.37
TCRBV4S1A1TA0A5B7 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC17.35■□□□□ 0.37
TCRBV4S1A1TA0A5B7 AC139530.1-201ENST00000575312 1977 ntBASIC17.35■□□□□ 0.37
TCRBV4S1A1TA0A5B7 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TCRBV4S1A1TA0A5B7 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TCRBV4S1A1TA0A5B7 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC17.35■□□□□ 0.37
TCRBV4S1A1TA0A5B7 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TCRBV4S1A1TA0A5B7 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC17.35■□□□□ 0.37
TCRBV4S1A1TA0A5B7 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TCRBV4S1A1TA0A5B7 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
TCRBV4S1A1TA0A5B7 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TCRBV4S1A1TA0A5B7 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TCRBV4S1A1TA0A5B7 MYB-221ENST00000527615 2381 ntTSL 5 BASIC17.35■□□□□ 0.37
TCRBV4S1A1TA0A5B7 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TCRBV4S1A1TA0A5B7 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TCRBV4S1A1TA0A5B7 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
TCRBV4S1A1TA0A5B7 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
TCRBV4S1A1TA0A5B7 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC17.34■□□□□ 0.37
TCRBV4S1A1TA0A5B7 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC17.34■□□□□ 0.37
TCRBV4S1A1TA0A5B7 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
TCRBV4S1A1TA0A5B7 SLC47A1P1-202ENST00000449666 945 ntBASIC17.34■□□□□ 0.37
TCRBV4S1A1TA0A5B7 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC17.34■□□□□ 0.37
TCRBV4S1A1TA0A5B7 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC17.34■□□□□ 0.37
TCRBV4S1A1TA0A5B7 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
TCRBV4S1A1TA0A5B7 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TCRBV4S1A1TA0A5B7 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC17.34■□□□□ 0.37
TCRBV4S1A1TA0A5B7 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC17.34■□□□□ 0.37
TCRBV4S1A1TA0A5B7 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC17.33■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 16.6 ms