Protein–RNA interactions for Protein: A0A1W2PPF3

DUXB, Double homeobox B, humanhuman

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUXBA0A1W2PPF3 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
DUXBA0A1W2PPF3 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
DUXBA0A1W2PPF3 TK2-202ENST00000417693 1046 ntTSL 2 BASIC17.68■□□□□ 0.42
DUXBA0A1W2PPF3 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC17.68■□□□□ 0.42
DUXBA0A1W2PPF3 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
DUXBA0A1W2PPF3 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
DUXBA0A1W2PPF3 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC17.68■□□□□ 0.42
DUXBA0A1W2PPF3 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
DUXBA0A1W2PPF3 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
DUXBA0A1W2PPF3 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC17.67■□□□□ 0.42
DUXBA0A1W2PPF3 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
DUXBA0A1W2PPF3 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
DUXBA0A1W2PPF3 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC17.67■□□□□ 0.42
DUXBA0A1W2PPF3 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
DUXBA0A1W2PPF3 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC17.67■□□□□ 0.42
DUXBA0A1W2PPF3 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
DUXBA0A1W2PPF3 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
DUXBA0A1W2PPF3 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
DUXBA0A1W2PPF3 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
DUXBA0A1W2PPF3 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
DUXBA0A1W2PPF3 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
DUXBA0A1W2PPF3 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
DUXBA0A1W2PPF3 AC073130.3-201ENST00000624389 2278 ntBASIC17.67■□□□□ 0.42
DUXBA0A1W2PPF3 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
DUXBA0A1W2PPF3 LINC01521-201ENST00000504184 1943 ntBASIC17.66■□□□□ 0.42
DUXBA0A1W2PPF3 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
DUXBA0A1W2PPF3 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
DUXBA0A1W2PPF3 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
DUXBA0A1W2PPF3 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
DUXBA0A1W2PPF3 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
DUXBA0A1W2PPF3 MIR6722-201ENST00000617286 78 ntBASIC17.66■□□□□ 0.42
DUXBA0A1W2PPF3 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC17.66■□□□□ 0.42
DUXBA0A1W2PPF3 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC17.66■□□□□ 0.42
DUXBA0A1W2PPF3 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC17.66■□□□□ 0.42
DUXBA0A1W2PPF3 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
DUXBA0A1W2PPF3 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC17.66■□□□□ 0.42
DUXBA0A1W2PPF3 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC17.66■□□□□ 0.42
DUXBA0A1W2PPF3 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
DUXBA0A1W2PPF3 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC17.65■□□□□ 0.42
DUXBA0A1W2PPF3 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
DUXBA0A1W2PPF3 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
DUXBA0A1W2PPF3 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
DUXBA0A1W2PPF3 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
DUXBA0A1W2PPF3 AC004687.1-201ENST00000579003 1625 ntBASIC17.65■□□□□ 0.42
DUXBA0A1W2PPF3 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
DUXBA0A1W2PPF3 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
DUXBA0A1W2PPF3 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
DUXBA0A1W2PPF3 DUX4L18-201ENST00000553347 1267 ntBASIC17.65■□□□□ 0.42
DUXBA0A1W2PPF3 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
DUXBA0A1W2PPF3 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
DUXBA0A1W2PPF3 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
DUXBA0A1W2PPF3 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
DUXBA0A1W2PPF3 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
DUXBA0A1W2PPF3 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
DUXBA0A1W2PPF3 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
DUXBA0A1W2PPF3 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
DUXBA0A1W2PPF3 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
DUXBA0A1W2PPF3 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
DUXBA0A1W2PPF3 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
DUXBA0A1W2PPF3 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
DUXBA0A1W2PPF3 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
DUXBA0A1W2PPF3 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
DUXBA0A1W2PPF3 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
DUXBA0A1W2PPF3 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC17.64■□□□□ 0.41
DUXBA0A1W2PPF3 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
DUXBA0A1W2PPF3 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC17.64■□□□□ 0.41
DUXBA0A1W2PPF3 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC17.64■□□□□ 0.41
DUXBA0A1W2PPF3 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC17.64■□□□□ 0.41
DUXBA0A1W2PPF3 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
DUXBA0A1W2PPF3 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
DUXBA0A1W2PPF3 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC17.64■□□□□ 0.41
DUXBA0A1W2PPF3 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
DUXBA0A1W2PPF3 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
DUXBA0A1W2PPF3 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
DUXBA0A1W2PPF3 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
DUXBA0A1W2PPF3 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
DUXBA0A1W2PPF3 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
DUXBA0A1W2PPF3 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
DUXBA0A1W2PPF3 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
DUXBA0A1W2PPF3 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC17.63■□□□□ 0.41
DUXBA0A1W2PPF3 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
DUXBA0A1W2PPF3 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
DUXBA0A1W2PPF3 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
DUXBA0A1W2PPF3 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
DUXBA0A1W2PPF3 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC17.63■□□□□ 0.41
DUXBA0A1W2PPF3 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC17.63■□□□□ 0.41
DUXBA0A1W2PPF3 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
DUXBA0A1W2PPF3 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC17.63■□□□□ 0.41
DUXBA0A1W2PPF3 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
DUXBA0A1W2PPF3 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC17.63■□□□□ 0.41
DUXBA0A1W2PPF3 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC17.63■□□□□ 0.41
DUXBA0A1W2PPF3 AC104564.3-201ENST00000582367 638 ntBASIC17.63■□□□□ 0.41
DUXBA0A1W2PPF3 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC17.63■□□□□ 0.41
DUXBA0A1W2PPF3 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC17.63■□□□□ 0.41
DUXBA0A1W2PPF3 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
DUXBA0A1W2PPF3 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
DUXBA0A1W2PPF3 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC17.63■□□□□ 0.41
DUXBA0A1W2PPF3 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
DUXBA0A1W2PPF3 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
DUXBA0A1W2PPF3 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC17.62■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 16.8 ms