Protein–RNA interactions for Protein: A0A1B0GX56

TRDV1, T-cell receptor delta variable 1 (Fragment), humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRDV1A0A1B0GX56 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
TRDV1A0A1B0GX56 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TRDV1A0A1B0GX56 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC19.07■□□□□ 0.64
TRDV1A0A1B0GX56 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
TRDV1A0A1B0GX56 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TRDV1A0A1B0GX56 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC19.07■□□□□ 0.64
TRDV1A0A1B0GX56 DUX4L4-201ENST00000566884 1269 ntBASIC19.07■□□□□ 0.64
TRDV1A0A1B0GX56 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
TRDV1A0A1B0GX56 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
TRDV1A0A1B0GX56 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TRDV1A0A1B0GX56 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
TRDV1A0A1B0GX56 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TRDV1A0A1B0GX56 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC19.07■□□□□ 0.64
TRDV1A0A1B0GX56 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
TRDV1A0A1B0GX56 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
TRDV1A0A1B0GX56 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TRDV1A0A1B0GX56 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC19.06■□□□□ 0.64
TRDV1A0A1B0GX56 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
TRDV1A0A1B0GX56 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC19.06■□□□□ 0.64
TRDV1A0A1B0GX56 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
TRDV1A0A1B0GX56 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
TRDV1A0A1B0GX56 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC19.06■□□□□ 0.64
TRDV1A0A1B0GX56 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TRDV1A0A1B0GX56 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TRDV1A0A1B0GX56 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TRDV1A0A1B0GX56 MIR4449-201ENST00000578365 66 ntBASIC19.06■□□□□ 0.64
TRDV1A0A1B0GX56 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
TRDV1A0A1B0GX56 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TRDV1A0A1B0GX56 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC19.06■□□□□ 0.64
TRDV1A0A1B0GX56 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC19.06■□□□□ 0.64
TRDV1A0A1B0GX56 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC19.06■□□□□ 0.64
TRDV1A0A1B0GX56 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
TRDV1A0A1B0GX56 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
TRDV1A0A1B0GX56 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC19.06■□□□□ 0.64
TRDV1A0A1B0GX56 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC19.06■□□□□ 0.64
TRDV1A0A1B0GX56 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC19.06■□□□□ 0.64
TRDV1A0A1B0GX56 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
TRDV1A0A1B0GX56 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
TRDV1A0A1B0GX56 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC19.05■□□□□ 0.64
TRDV1A0A1B0GX56 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
TRDV1A0A1B0GX56 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
TRDV1A0A1B0GX56 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC19.05■□□□□ 0.64
TRDV1A0A1B0GX56 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TRDV1A0A1B0GX56 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TRDV1A0A1B0GX56 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TRDV1A0A1B0GX56 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC19.05■□□□□ 0.64
TRDV1A0A1B0GX56 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
TRDV1A0A1B0GX56 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TRDV1A0A1B0GX56 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TRDV1A0A1B0GX56 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TRDV1A0A1B0GX56 ASB1-202ENST00000409297 878 ntTSL 5 BASIC19.05■□□□□ 0.64
TRDV1A0A1B0GX56 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC19.05■□□□□ 0.64
TRDV1A0A1B0GX56 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
TRDV1A0A1B0GX56 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
TRDV1A0A1B0GX56 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TRDV1A0A1B0GX56 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
TRDV1A0A1B0GX56 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TRDV1A0A1B0GX56 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
TRDV1A0A1B0GX56 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TRDV1A0A1B0GX56 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC19.04■□□□□ 0.64
TRDV1A0A1B0GX56 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
TRDV1A0A1B0GX56 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TRDV1A0A1B0GX56 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC19.04■□□□□ 0.64
TRDV1A0A1B0GX56 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC19.04■□□□□ 0.64
TRDV1A0A1B0GX56 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TRDV1A0A1B0GX56 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TRDV1A0A1B0GX56 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
TRDV1A0A1B0GX56 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TRDV1A0A1B0GX56 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC19.04■□□□□ 0.64
TRDV1A0A1B0GX56 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
TRDV1A0A1B0GX56 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC19.03■□□□□ 0.64
TRDV1A0A1B0GX56 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
TRDV1A0A1B0GX56 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
TRDV1A0A1B0GX56 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TRDV1A0A1B0GX56 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TRDV1A0A1B0GX56 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC19.03■□□□□ 0.64
TRDV1A0A1B0GX56 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
TRDV1A0A1B0GX56 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC19.03■□□□□ 0.64
TRDV1A0A1B0GX56 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC19.03■□□□□ 0.64
TRDV1A0A1B0GX56 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC19.03■□□□□ 0.64
TRDV1A0A1B0GX56 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
TRDV1A0A1B0GX56 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC19.03■□□□□ 0.64
TRDV1A0A1B0GX56 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
TRDV1A0A1B0GX56 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC19.03■□□□□ 0.64
TRDV1A0A1B0GX56 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC19.03■□□□□ 0.64
TRDV1A0A1B0GX56 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TRDV1A0A1B0GX56 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
TRDV1A0A1B0GX56 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TRDV1A0A1B0GX56 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC19.02■□□□□ 0.64
TRDV1A0A1B0GX56 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
TRDV1A0A1B0GX56 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC19.02■□□□□ 0.64
TRDV1A0A1B0GX56 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
TRDV1A0A1B0GX56 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
TRDV1A0A1B0GX56 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC19.02■□□□□ 0.64
TRDV1A0A1B0GX56 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
TRDV1A0A1B0GX56 SNX5-217ENST00000606557 1087 ntBASIC19.02■□□□□ 0.64
TRDV1A0A1B0GX56 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
TRDV1A0A1B0GX56 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TRDV1A0A1B0GX56 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
TRDV1A0A1B0GX56 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms