Protein–RNA interactions for Protein: A0A0B4J273

TRAV34, T-cell receptor alpha variable 34 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV34A0A0B4J273 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TRAV34A0A0B4J273 RNF126P1-201ENST00000567452 1320 ntBASIC16.7■□□□□ 0.26
TRAV34A0A0B4J273 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TRAV34A0A0B4J273 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRAV34A0A0B4J273 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
TRAV34A0A0B4J273 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC16.69■□□□□ 0.26
TRAV34A0A0B4J273 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
TRAV34A0A0B4J273 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
TRAV34A0A0B4J273 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC16.69■□□□□ 0.26
TRAV34A0A0B4J273 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC16.69■□□□□ 0.26
TRAV34A0A0B4J273 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
TRAV34A0A0B4J273 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
TRAV34A0A0B4J273 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRAV34A0A0B4J273 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRAV34A0A0B4J273 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRAV34A0A0B4J273 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
TRAV34A0A0B4J273 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRAV34A0A0B4J273 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC16.69■□□□□ 0.26
TRAV34A0A0B4J273 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRAV34A0A0B4J273 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRAV34A0A0B4J273 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRAV34A0A0B4J273 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRAV34A0A0B4J273 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRAV34A0A0B4J273 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
TRAV34A0A0B4J273 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC16.68■□□□□ 0.26
TRAV34A0A0B4J273 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRAV34A0A0B4J273 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRAV34A0A0B4J273 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRAV34A0A0B4J273 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRAV34A0A0B4J273 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC16.68■□□□□ 0.26
TRAV34A0A0B4J273 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRAV34A0A0B4J273 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRAV34A0A0B4J273 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRAV34A0A0B4J273 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC16.67■□□□□ 0.26
TRAV34A0A0B4J273 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRAV34A0A0B4J273 AC144652.1-201ENST00000609974 1624 ntBASIC16.67■□□□□ 0.26
TRAV34A0A0B4J273 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TRAV34A0A0B4J273 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRAV34A0A0B4J273 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRAV34A0A0B4J273 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC16.67■□□□□ 0.26
TRAV34A0A0B4J273 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
TRAV34A0A0B4J273 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRAV34A0A0B4J273 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC16.67■□□□□ 0.26
TRAV34A0A0B4J273 MIR4449-201ENST00000578365 66 ntBASIC16.67■□□□□ 0.26
TRAV34A0A0B4J273 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC16.67■□□□□ 0.26
TRAV34A0A0B4J273 AF131216.4-201ENST00000638924 1588 ntBASIC16.67■□□□□ 0.26
TRAV34A0A0B4J273 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
TRAV34A0A0B4J273 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRAV34A0A0B4J273 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRAV34A0A0B4J273 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TRAV34A0A0B4J273 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
TRAV34A0A0B4J273 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC16.66■□□□□ 0.26
TRAV34A0A0B4J273 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TRAV34A0A0B4J273 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRAV34A0A0B4J273 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRAV34A0A0B4J273 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC16.66■□□□□ 0.26
TRAV34A0A0B4J273 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
TRAV34A0A0B4J273 AC004448.1-201ENST00000458332 883 ntBASIC16.66■□□□□ 0.26
TRAV34A0A0B4J273 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC16.66■□□□□ 0.26
TRAV34A0A0B4J273 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRAV34A0A0B4J273 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
TRAV34A0A0B4J273 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC16.66■□□□□ 0.26
TRAV34A0A0B4J273 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRAV34A0A0B4J273 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRAV34A0A0B4J273 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRAV34A0A0B4J273 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRAV34A0A0B4J273 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
TRAV34A0A0B4J273 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRAV34A0A0B4J273 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
TRAV34A0A0B4J273 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC16.65■□□□□ 0.26
TRAV34A0A0B4J273 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRAV34A0A0B4J273 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRAV34A0A0B4J273 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRAV34A0A0B4J273 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TRAV34A0A0B4J273 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRAV34A0A0B4J273 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRAV34A0A0B4J273 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC16.65■□□□□ 0.26
TRAV34A0A0B4J273 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
TRAV34A0A0B4J273 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRAV34A0A0B4J273 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.26
TRAV34A0A0B4J273 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC16.64■□□□□ 0.26
TRAV34A0A0B4J273 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.26
TRAV34A0A0B4J273 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRAV34A0A0B4J273 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRAV34A0A0B4J273 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
TRAV34A0A0B4J273 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRAV34A0A0B4J273 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TRAV34A0A0B4J273 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TRAV34A0A0B4J273 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC16.64■□□□□ 0.25
TRAV34A0A0B4J273 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
TRAV34A0A0B4J273 AC022616.5-201ENST00000518796 181 ntBASIC16.64■□□□□ 0.25
TRAV34A0A0B4J273 AC120024.1-201ENST00000562672 995 ntBASIC16.64■□□□□ 0.25
TRAV34A0A0B4J273 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
TRAV34A0A0B4J273 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TRAV34A0A0B4J273 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRAV34A0A0B4J273 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRAV34A0A0B4J273 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC16.64■□□□□ 0.25
TRAV34A0A0B4J273 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
TRAV34A0A0B4J273 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
TRAV34A0A0B4J273 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms