Protein–RNA interactions for Protein: A0A0A6YYK1

TRAV8-1, T-cell receptor alpha variable 8-1 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-1A0A0A6YYK1 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC16.44■□□□□ 0.22
TRAV8-1A0A0A6YYK1 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
TRAV8-1A0A0A6YYK1 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRAV8-1A0A0A6YYK1 SENP5-202ENST00000419026 973 ntTSL 3 BASIC16.44■□□□□ 0.22
TRAV8-1A0A0A6YYK1 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRAV8-1A0A0A6YYK1 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRAV8-1A0A0A6YYK1 AC073130.3-201ENST00000624389 2278 ntBASIC16.44■□□□□ 0.22
TRAV8-1A0A0A6YYK1 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
TRAV8-1A0A0A6YYK1 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC16.44■□□□□ 0.22
TRAV8-1A0A0A6YYK1 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC16.44■□□□□ 0.22
TRAV8-1A0A0A6YYK1 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
TRAV8-1A0A0A6YYK1 AC005703.6-201ENST00000623265 1329 ntBASIC16.44■□□□□ 0.22
TRAV8-1A0A0A6YYK1 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
TRAV8-1A0A0A6YYK1 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
TRAV8-1A0A0A6YYK1 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRAV8-1A0A0A6YYK1 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRAV8-1A0A0A6YYK1 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
TRAV8-1A0A0A6YYK1 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRAV8-1A0A0A6YYK1 TSPY13P-201ENST00000338964 914 ntBASIC16.43■□□□□ 0.22
TRAV8-1A0A0A6YYK1 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRAV8-1A0A0A6YYK1 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC16.43■□□□□ 0.22
TRAV8-1A0A0A6YYK1 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
TRAV8-1A0A0A6YYK1 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRAV8-1A0A0A6YYK1 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRAV8-1A0A0A6YYK1 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRAV8-1A0A0A6YYK1 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRAV8-1A0A0A6YYK1 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
TRAV8-1A0A0A6YYK1 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
TRAV8-1A0A0A6YYK1 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
TRAV8-1A0A0A6YYK1 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
TRAV8-1A0A0A6YYK1 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRAV8-1A0A0A6YYK1 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRAV8-1A0A0A6YYK1 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRAV8-1A0A0A6YYK1 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
TRAV8-1A0A0A6YYK1 AF106564.1-201ENST00000607058 2553 ntBASIC16.42■□□□□ 0.22
TRAV8-1A0A0A6YYK1 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRAV8-1A0A0A6YYK1 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC16.42■□□□□ 0.22
TRAV8-1A0A0A6YYK1 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC16.42■□□□□ 0.22
TRAV8-1A0A0A6YYK1 MIR4508-201ENST00000584178 70 ntBASIC16.42■□□□□ 0.22
TRAV8-1A0A0A6YYK1 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC16.42■□□□□ 0.22
TRAV8-1A0A0A6YYK1 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC16.42■□□□□ 0.22
TRAV8-1A0A0A6YYK1 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRAV8-1A0A0A6YYK1 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC16.42■□□□□ 0.22
TRAV8-1A0A0A6YYK1 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC16.42■□□□□ 0.22
TRAV8-1A0A0A6YYK1 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
TRAV8-1A0A0A6YYK1 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRAV8-1A0A0A6YYK1 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC16.41■□□□□ 0.22
TRAV8-1A0A0A6YYK1 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC16.41■□□□□ 0.22
TRAV8-1A0A0A6YYK1 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC16.41■□□□□ 0.22
TRAV8-1A0A0A6YYK1 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRAV8-1A0A0A6YYK1 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRAV8-1A0A0A6YYK1 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
TRAV8-1A0A0A6YYK1 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
TRAV8-1A0A0A6YYK1 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC16.41■□□□□ 0.22
TRAV8-1A0A0A6YYK1 DUX4L4-201ENST00000566884 1269 ntBASIC16.41■□□□□ 0.22
TRAV8-1A0A0A6YYK1 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRAV8-1A0A0A6YYK1 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
TRAV8-1A0A0A6YYK1 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRAV8-1A0A0A6YYK1 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC16.41■□□□□ 0.22
TRAV8-1A0A0A6YYK1 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRAV8-1A0A0A6YYK1 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRAV8-1A0A0A6YYK1 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRAV8-1A0A0A6YYK1 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC16.41■□□□□ 0.22
TRAV8-1A0A0A6YYK1 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRAV8-1A0A0A6YYK1 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC16.4■□□□□ 0.22
TRAV8-1A0A0A6YYK1 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC16.4■□□□□ 0.22
TRAV8-1A0A0A6YYK1 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
TRAV8-1A0A0A6YYK1 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRAV8-1A0A0A6YYK1 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRAV8-1A0A0A6YYK1 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRAV8-1A0A0A6YYK1 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRAV8-1A0A0A6YYK1 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TRAV8-1A0A0A6YYK1 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRAV8-1A0A0A6YYK1 GUK1-208ENST00000366728 842 ntTSL 2 BASIC16.4■□□□□ 0.22
TRAV8-1A0A0A6YYK1 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC16.4■□□□□ 0.22
TRAV8-1A0A0A6YYK1 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC16.4■□□□□ 0.22
TRAV8-1A0A0A6YYK1 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRAV8-1A0A0A6YYK1 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRAV8-1A0A0A6YYK1 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRAV8-1A0A0A6YYK1 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC16.4■□□□□ 0.22
TRAV8-1A0A0A6YYK1 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
TRAV8-1A0A0A6YYK1 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRAV8-1A0A0A6YYK1 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRAV8-1A0A0A6YYK1 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRAV8-1A0A0A6YYK1 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRAV8-1A0A0A6YYK1 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRAV8-1A0A0A6YYK1 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
TRAV8-1A0A0A6YYK1 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
TRAV8-1A0A0A6YYK1 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC16.39■□□□□ 0.21
TRAV8-1A0A0A6YYK1 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC16.39■□□□□ 0.21
TRAV8-1A0A0A6YYK1 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRAV8-1A0A0A6YYK1 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRAV8-1A0A0A6YYK1 Z98882.1-201ENST00000622160 2253 ntBASIC16.39■□□□□ 0.21
TRAV8-1A0A0A6YYK1 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRAV8-1A0A0A6YYK1 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
TRAV8-1A0A0A6YYK1 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC16.39■□□□□ 0.21
TRAV8-1A0A0A6YYK1 KRT8P33-201ENST00000508125 1423 ntBASIC16.39■□□□□ 0.21
TRAV8-1A0A0A6YYK1 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRAV8-1A0A0A6YYK1 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
TRAV8-1A0A0A6YYK1 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 129.6 ms