Protein–RNA interactions for Protein: A0A0A6YY99

TNFSF12-TNFSF13, Protein TNFSF12-TNFSF13, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF12-TNFSF13A0A0A6YY99 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC19.73■□□□□ 0.75
TNFSF12-TNFSF13A0A0A6YY99 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC19.73■□□□□ 0.75
TNFSF12-TNFSF13A0A0A6YY99 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
TNFSF12-TNFSF13A0A0A6YY99 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TNFSF12-TNFSF13A0A0A6YY99 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TNFSF12-TNFSF13A0A0A6YY99 OXCT2P1-201ENST00000447263 1535 ntBASIC19.72■□□□□ 0.75
TNFSF12-TNFSF13A0A0A6YY99 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TNFSF12-TNFSF13A0A0A6YY99 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TNFSF12-TNFSF13A0A0A6YY99 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
TNFSF12-TNFSF13A0A0A6YY99 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC19.72■□□□□ 0.75
TNFSF12-TNFSF13A0A0A6YY99 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
TNFSF12-TNFSF13A0A0A6YY99 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
TNFSF12-TNFSF13A0A0A6YY99 AC139530.1-201ENST00000575312 1977 ntBASIC19.72■□□□□ 0.75
TNFSF12-TNFSF13A0A0A6YY99 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC19.71■□□□□ 0.75
TNFSF12-TNFSF13A0A0A6YY99 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC19.71■□□□□ 0.75
TNFSF12-TNFSF13A0A0A6YY99 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
TNFSF12-TNFSF13A0A0A6YY99 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
TNFSF12-TNFSF13A0A0A6YY99 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
TNFSF12-TNFSF13A0A0A6YY99 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC19.71■□□□□ 0.75
TNFSF12-TNFSF13A0A0A6YY99 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TNFSF12-TNFSF13A0A0A6YY99 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC19.71■□□□□ 0.75
TNFSF12-TNFSF13A0A0A6YY99 IGHV3-19-201ENST00000521488 291 ntBASIC19.71■□□□□ 0.75
TNFSF12-TNFSF13A0A0A6YY99 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
TNFSF12-TNFSF13A0A0A6YY99 AICDA-202ENST00000537228 667 ntTSL 5 BASIC19.71■□□□□ 0.75
TNFSF12-TNFSF13A0A0A6YY99 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
TNFSF12-TNFSF13A0A0A6YY99 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TNFSF12-TNFSF13A0A0A6YY99 ECEL1P1-201ENST00000373592 1742 ntBASIC19.71■□□□□ 0.75
TNFSF12-TNFSF13A0A0A6YY99 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
TNFSF12-TNFSF13A0A0A6YY99 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
TNFSF12-TNFSF13A0A0A6YY99 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC19.7■□□□□ 0.74
TNFSF12-TNFSF13A0A0A6YY99 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC19.7■□□□□ 0.74
TNFSF12-TNFSF13A0A0A6YY99 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TNFSF12-TNFSF13A0A0A6YY99 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
TNFSF12-TNFSF13A0A0A6YY99 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
TNFSF12-TNFSF13A0A0A6YY99 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
TNFSF12-TNFSF13A0A0A6YY99 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC19.7■□□□□ 0.74
TNFSF12-TNFSF13A0A0A6YY99 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC19.7■□□□□ 0.74
TNFSF12-TNFSF13A0A0A6YY99 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC19.7■□□□□ 0.74
TNFSF12-TNFSF13A0A0A6YY99 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC19.7■□□□□ 0.74
TNFSF12-TNFSF13A0A0A6YY99 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TNFSF12-TNFSF13A0A0A6YY99 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TNFSF12-TNFSF13A0A0A6YY99 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TNFSF12-TNFSF13A0A0A6YY99 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TNFSF12-TNFSF13A0A0A6YY99 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
TNFSF12-TNFSF13A0A0A6YY99 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC19.69■□□□□ 0.74
TNFSF12-TNFSF13A0A0A6YY99 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TNFSF12-TNFSF13A0A0A6YY99 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
TNFSF12-TNFSF13A0A0A6YY99 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
TNFSF12-TNFSF13A0A0A6YY99 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC19.69■□□□□ 0.74
TNFSF12-TNFSF13A0A0A6YY99 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC19.69■□□□□ 0.74
TNFSF12-TNFSF13A0A0A6YY99 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC19.69■□□□□ 0.74
TNFSF12-TNFSF13A0A0A6YY99 MIR6821-201ENST00000617625 74 ntBASIC19.69■□□□□ 0.74
TNFSF12-TNFSF13A0A0A6YY99 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
TNFSF12-TNFSF13A0A0A6YY99 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
TNFSF12-TNFSF13A0A0A6YY99 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
TNFSF12-TNFSF13A0A0A6YY99 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC19.69■□□□□ 0.74
TNFSF12-TNFSF13A0A0A6YY99 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC19.69■□□□□ 0.74
TNFSF12-TNFSF13A0A0A6YY99 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
TNFSF12-TNFSF13A0A0A6YY99 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC19.69■□□□□ 0.74
TNFSF12-TNFSF13A0A0A6YY99 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TNFSF12-TNFSF13A0A0A6YY99 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
TNFSF12-TNFSF13A0A0A6YY99 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TNFSF12-TNFSF13A0A0A6YY99 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TNFSF12-TNFSF13A0A0A6YY99 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TNFSF12-TNFSF13A0A0A6YY99 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TNFSF12-TNFSF13A0A0A6YY99 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TNFSF12-TNFSF13A0A0A6YY99 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
TNFSF12-TNFSF13A0A0A6YY99 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
TNFSF12-TNFSF13A0A0A6YY99 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC19.68■□□□□ 0.74
TNFSF12-TNFSF13A0A0A6YY99 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC19.68■□□□□ 0.74
TNFSF12-TNFSF13A0A0A6YY99 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC19.68■□□□□ 0.74
TNFSF12-TNFSF13A0A0A6YY99 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
TNFSF12-TNFSF13A0A0A6YY99 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC19.68■□□□□ 0.74
TNFSF12-TNFSF13A0A0A6YY99 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TNFSF12-TNFSF13A0A0A6YY99 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
TNFSF12-TNFSF13A0A0A6YY99 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
TNFSF12-TNFSF13A0A0A6YY99 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
TNFSF12-TNFSF13A0A0A6YY99 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
TNFSF12-TNFSF13A0A0A6YY99 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TNFSF12-TNFSF13A0A0A6YY99 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TNFSF12-TNFSF13A0A0A6YY99 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
TNFSF12-TNFSF13A0A0A6YY99 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TNFSF12-TNFSF13A0A0A6YY99 LINC00526-201ENST00000581067 1875 ntBASIC19.67■□□□□ 0.74
TNFSF12-TNFSF13A0A0A6YY99 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC19.67■□□□□ 0.74
TNFSF12-TNFSF13A0A0A6YY99 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
TNFSF12-TNFSF13A0A0A6YY99 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TNFSF12-TNFSF13A0A0A6YY99 JTB-203ENST00000368589 1216 ntTSL 2 BASIC19.67■□□□□ 0.74
TNFSF12-TNFSF13A0A0A6YY99 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TNFSF12-TNFSF13A0A0A6YY99 AC097381.1-201ENST00000429019 1296 ntBASIC19.67■□□□□ 0.74
TNFSF12-TNFSF13A0A0A6YY99 MIR5787-201ENST00000611784 55 ntBASIC19.67■□□□□ 0.74
TNFSF12-TNFSF13A0A0A6YY99 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
TNFSF12-TNFSF13A0A0A6YY99 TSPY26P-201ENST00000476365 1326 ntBASIC19.67■□□□□ 0.74
TNFSF12-TNFSF13A0A0A6YY99 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TNFSF12-TNFSF13A0A0A6YY99 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
TNFSF12-TNFSF13A0A0A6YY99 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC19.66■□□□□ 0.74
TNFSF12-TNFSF13A0A0A6YY99 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TNFSF12-TNFSF13A0A0A6YY99 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC19.66■□□□□ 0.74
TNFSF12-TNFSF13A0A0A6YY99 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TNFSF12-TNFSF13A0A0A6YY99 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC19.66■□□□□ 0.74
TNFSF12-TNFSF13A0A0A6YY99 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms