Protein–RNA interactions for Protein: Q96PD5

PGLYRP2, N-acetylmuramoyl-L-alanine amidase, humanhuman

Predictions only

Length 576 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PGLYRP2Q96PD5 CELF4-218ENST00000591287 3757 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.31
PGLYRP2Q96PD5 IGSF9-201ENST00000361509 3996 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
PGLYRP2Q96PD5 MTHFD2-202ENST00000409601 1865 ntTSL 5 BASIC13.14□□□□□ -0.31
PGLYRP2Q96PD5 SC5D-208ENST00000534230 1861 ntTSL 5 BASIC13.14□□□□□ -0.31
PGLYRP2Q96PD5 MRVI1-216ENST00000547195 6155 ntTSL 2 BASIC13.14□□□□□ -0.31
PGLYRP2Q96PD5 LMX1A-202ENST00000342310 3545 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
PGLYRP2Q96PD5 PAX2-201ENST00000355243 4057 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
PGLYRP2Q96PD5 CCDC14-220ENST00000488653 4156 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
PGLYRP2Q96PD5 AC016831.5-201ENST00000605249 1998 ntBASIC13.14□□□□□ -0.31
PGLYRP2Q96PD5 PPFIA4-210ENST00000599966 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
PGLYRP2Q96PD5 NBEA-204ENST00000400445 11119 ntAPPRIS P2 TSL 5 BASIC13.14□□□□□ -0.31
PGLYRP2Q96PD5 PTPRD-AS2-201ENST00000429581 2838 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
PGLYRP2Q96PD5 INIP-203ENST00000374242 4233 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
PGLYRP2Q96PD5 BEND6-202ENST00000370746 2379 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
PGLYRP2Q96PD5 ASXL1-201ENST00000306058 6591 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
PGLYRP2Q96PD5 STK40-201ENST00000359297 4837 ntTSL 2 BASIC13.14□□□□□ -0.31
PGLYRP2Q96PD5 UQCRB-201ENST00000287022 5575 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
PGLYRP2Q96PD5 RAB10-201ENST00000264710 3535 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
PGLYRP2Q96PD5 EEF1AKMT3-202ENST00000333012 2762 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
PGLYRP2Q96PD5 HOXA7-201ENST00000242159 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
PGLYRP2Q96PD5 RPS6-201ENST00000315377 863 ntTSL 3 BASIC13.14□□□□□ -0.31
PGLYRP2Q96PD5 CCL26-202ENST00000394905 703 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
PGLYRP2Q96PD5 AL021407.3-201ENST00000407522 486 ntBASIC13.14□□□□□ -0.31
PGLYRP2Q96PD5 AL356583.3-201ENST00000412354 417 ntBASIC13.14□□□□□ -0.31
PGLYRP2Q96PD5 HLA-U-204ENST00000418981 186 ntBASIC13.14□□□□□ -0.31
PGLYRP2Q96PD5 LINC01494-201ENST00000419511 1011 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
PGLYRP2Q96PD5 AC013436.1-201ENST00000425077 422 ntTSL 3 BASIC13.14□□□□□ -0.31
PGLYRP2Q96PD5 ACTG1P10-201ENST00000428275 1082 ntBASIC13.14□□□□□ -0.31
PGLYRP2Q96PD5 RN7SL265P-201ENST00000486808 300 ntBASIC13.14□□□□□ -0.31
PGLYRP2Q96PD5 AC023886.1-202ENST00000504009 477 ntTSL 3 BASIC13.14□□□□□ -0.31
PGLYRP2Q96PD5 AC005355.1-201ENST00000513329 714 ntTSL 3 BASIC13.14□□□□□ -0.31
PGLYRP2Q96PD5 FOS-205ENST00000555242 629 ntTSL 2 BASIC13.14□□□□□ -0.31
PGLYRP2Q96PD5 ATP6V1D-209ENST00000555431 1085 ntTSL 5 BASIC13.14□□□□□ -0.31
PGLYRP2Q96PD5 ATP6V1D-210ENST00000555474 1102 ntTSL 5 BASIC13.14□□□□□ -0.31
PGLYRP2Q96PD5 AC009166.1-201ENST00000570060 487 ntTSL 2 BASIC13.14□□□□□ -0.31
PGLYRP2Q96PD5 SKAP1-AS1-201ENST00000582246 687 ntTSL 2 BASIC13.14□□□□□ -0.31
PGLYRP2Q96PD5 AC092329.1-201ENST00000594653 574 ntTSL 5 BASIC13.14□□□□□ -0.31
PGLYRP2Q96PD5 AC105105.4-201ENST00000610389 713 ntBASIC13.14□□□□□ -0.31
PGLYRP2Q96PD5 Metazoa_SRP.64-201ENST00000611904 268 ntBASIC13.14□□□□□ -0.31
PGLYRP2Q96PD5 AC012313.9-201ENST00000619318 633 ntBASIC13.14□□□□□ -0.31
PGLYRP2Q96PD5 ACOT11-201ENST00000343744 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
PGLYRP2Q96PD5 NBPF1-203ENST00000430580 5932 ntAPPRIS P5 TSL 5 BASIC13.14□□□□□ -0.31
PGLYRP2Q96PD5 HECTD1-219ENST00000611816 8980 ntTSL 5 BASIC13.14□□□□□ -0.31
PGLYRP2Q96PD5 PGGHG-203ENST00000409548 3687 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
PGLYRP2Q96PD5 DIDO1-202ENST00000354665 2707 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
PGLYRP2Q96PD5 GGPS1-202ENST00000358966 2740 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
PGLYRP2Q96PD5 AC092819.1-201ENST00000519981 1690 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
PGLYRP2Q96PD5 RUBCNL-208ENST00000429979 3979 ntAPPRIS P3 TSL 5 BASIC13.14□□□□□ -0.31
PGLYRP2Q96PD5 CEP83-201ENST00000339839 3130 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
PGLYRP2Q96PD5 TRAPPC2L-211ENST00000565504 3102 ntTSL 2 BASIC13.14□□□□□ -0.31
PGLYRP2Q96PD5 GP6-203ENST00000417454 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
PGLYRP2Q96PD5 TASP1-201ENST00000337743 2352 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
PGLYRP2Q96PD5 TOE1-201ENST00000372090 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
PGLYRP2Q96PD5 DBIL5P-203ENST00000536214 2677 ntBASIC13.14□□□□□ -0.31
PGLYRP2Q96PD5 IMPDH1P8-201ENST00000413639 1525 ntBASIC13.13□□□□□ -0.31
PGLYRP2Q96PD5 AL353616.2-201ENST00000413269 1739 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
PGLYRP2Q96PD5 PLAU-201ENST00000372764 2321 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
PGLYRP2Q96PD5 OS9-201ENST00000257966 2505 ntAPPRIS ALT2 TSL 2 BASIC13.13□□□□□ -0.31
PGLYRP2Q96PD5 SNED1-201ENST00000310397 8174 ntAPPRIS P2 TSL 5 BASIC13.13□□□□□ -0.31
PGLYRP2Q96PD5 AL357054.4-201ENST00000606285 2814 ntBASIC13.13□□□□□ -0.31
PGLYRP2Q96PD5 GRIK1-203ENST00000389125 3140 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
PGLYRP2Q96PD5 OSBPL7-202ENST00000392507 3349 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
PGLYRP2Q96PD5 LIFR-AS1-201ENST00000500733 3803 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
PGLYRP2Q96PD5 RNF216-205ENST00000425013 5639 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
PGLYRP2Q96PD5 ANKRD11-203ENST00000378330 9132 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
PGLYRP2Q96PD5 PSMD11-201ENST00000261712 4098 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
PGLYRP2Q96PD5 AC008609.1-202ENST00000501818 2686 ntTSL 2 BASIC13.13□□□□□ -0.31
PGLYRP2Q96PD5 SCN8A-209ENST00000627620 5943 ntAPPRIS ALT1 TSL 5 BASIC13.13□□□□□ -0.31
PGLYRP2Q96PD5 PRAMEF12-201ENST00000357726 1786 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
PGLYRP2Q96PD5 PCYT1B-202ENST00000379144 1692 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
PGLYRP2Q96PD5 AC011525.2-202ENST00000590611 1657 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
PGLYRP2Q96PD5 AC011487.2-202ENST00000599707 1356 ntBASIC13.13□□□□□ -0.31
PGLYRP2Q96PD5 VAT1L-201ENST00000302536 3825 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
PGLYRP2Q96PD5 AC245297.1-201ENST00000313342 933 ntBASIC13.13□□□□□ -0.31
PGLYRP2Q96PD5 ARF1P2-201ENST00000392493 538 ntBASIC13.13□□□□□ -0.31
PGLYRP2Q96PD5 MED20-204ENST00000409312 932 ntTSL 2 BASIC13.13□□□□□ -0.31
PGLYRP2Q96PD5 RBM14-203ENST00000409372 876 ntTSL 2 BASIC13.13□□□□□ -0.31
PGLYRP2Q96PD5 CCDC153-202ENST00000415318 1173 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
PGLYRP2Q96PD5 AC253536.2-201ENST00000423307 254 ntBASIC13.13□□□□□ -0.31
PGLYRP2Q96PD5 PRSS3-204ENST00000429677 786 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
PGLYRP2Q96PD5 AC005838.1-201ENST00000430712 233 ntBASIC13.13□□□□□ -0.31
PGLYRP2Q96PD5 AC096540.1-201ENST00000436207 661 ntTSL 5 BASIC13.13□□□□□ -0.31
PGLYRP2Q96PD5 SLC48A1-202ENST00000442892 1024 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
PGLYRP2Q96PD5 LINC01297-202ENST00000453395 624 ntTSL 5 BASIC13.13□□□□□ -0.31
PGLYRP2Q96PD5 CHCHD2P6-201ENST00000454346 447 ntBASIC13.13□□□□□ -0.31
PGLYRP2Q96PD5 GUSBP3-202ENST00000513408 1296 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
PGLYRP2Q96PD5 AC023194.3-202ENST00000524253 364 ntTSL 3 BASIC13.13□□□□□ -0.31
PGLYRP2Q96PD5 AC087699.1-201ENST00000558111 393 ntBASIC13.13□□□□□ -0.31
PGLYRP2Q96PD5 BMF-209ENST00000561282 747 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
PGLYRP2Q96PD5 TIMM23-201ENST00000580018 1222 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
PGLYRP2Q96PD5 AFMID-205ENST00000586731 550 ntTSL 3 BASIC13.13□□□□□ -0.31
PGLYRP2Q96PD5 AFMID-210ENST00000589256 578 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
PGLYRP2Q96PD5 IGHV1OR15-1-201ENST00000604066 353 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
PGLYRP2Q96PD5 PDLIM2-218ENST00000614502 599 ntTSL 2 BASIC13.13□□□□□ -0.31
PGLYRP2Q96PD5 AC130469.2-201ENST00000625112 1092 ntBASIC13.13□□□□□ -0.31
PGLYRP2Q96PD5 AC135068.8-201ENST00000630556 353 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
PGLYRP2Q96PD5 OSTM1-AS1-202ENST00000441184 3334 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
PGLYRP2Q96PD5 ANKRD27-204ENST00000587352 3301 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
PGLYRP2Q96PD5 NMT2-202ENST00000378165 2907 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
PGLYRP2Q96PD5 ATF6B-210ENST00000375203 2620 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 58.6 ms