Protein–RNA interactions for Protein: P42898

MTHFR, Methylenetetrahydrofolate reductase, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFRP42898 GOLGA6L4-202ENST00000422563 4155 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
MTHFRP42898 RNF113A-201ENST00000371442 1353 ntAPPRIS P1 BASIC13□□□□□ -0.33
MTHFRP42898 GRIN1-205ENST00000371555 4003 ntTSL 5 BASIC13□□□□□ -0.33
MTHFRP42898 LINC01227-205ENST00000567317 1338 ntTSL 2 BASIC13□□□□□ -0.33
MTHFRP42898 CCDC187-204ENST00000624277 3918 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
MTHFRP42898 RPS16-201ENST00000251453 560 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
MTHFRP42898 GPHA2-201ENST00000279168 747 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
MTHFRP42898 SNAPC5-202ENST00000316634 1002 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
MTHFRP42898 AL451165.1-201ENST00000334441 328 ntBASIC13□□□□□ -0.33
MTHFRP42898 JPT2-202ENST00000382710 962 ntTSL 2 BASIC13□□□□□ -0.33
MTHFRP42898 RPL15P3-201ENST00000391491 615 ntBASIC13□□□□□ -0.33
MTHFRP42898 AQP7P1-201ENST00000412626 1045 ntBASIC13□□□□□ -0.33
MTHFRP42898 MAPT-208ENST00000431008 1233 ntTSL 5 BASIC13□□□□□ -0.33
MTHFRP42898 CD59-205ENST00000437761 758 ntAPPRIS P2 TSL 4 BASIC13□□□□□ -0.33
MTHFRP42898 HLA-DRB9-201ENST00000449413 343 ntBASIC13□□□□□ -0.33
MTHFRP42898 CLDN16-202ENST00000456423 430 ntTSL 1 (best) BASIC13□□□□□ -0.33
MTHFRP42898 FAXDC2-205ENST00000517938 1203 ntTSL 2 BASIC13□□□□□ -0.33
MTHFRP42898 AC023078.3-201ENST00000527463 958 ntBASIC13□□□□□ -0.33
MTHFRP42898 AP000439.1-201ENST00000544004 581 ntTSL 4 BASIC13□□□□□ -0.33
MTHFRP42898 AL049871.1-201ENST00000557475 880 ntTSL 5 BASIC13□□□□□ -0.33
MTHFRP42898 ARL17B-207ENST00000575960 731 ntAPPRIS ALT2 TSL 3 BASIC13□□□□□ -0.33
MTHFRP42898 AC100830.3-201ENST00000583044 554 ntBASIC13□□□□□ -0.33
MTHFRP42898 SNHG15-210ENST00000585030 953 ntTSL 3 BASIC13□□□□□ -0.33
MTHFRP42898 ZNF548-209ENST00000598895 571 ntTSL 4 BASIC13□□□□□ -0.33
MTHFRP42898 AP002986.1-203ENST00000602310 330 ntTSL 3 BASIC13□□□□□ -0.33
MTHFRP42898 DNAJB14-212ENST00000610281 339 ntTSL 5 BASIC13□□□□□ -0.33
MTHFRP42898 AC027281.2-201ENST00000623856 713 ntBASIC13□□□□□ -0.33
MTHFRP42898 AC012486.1-201ENST00000625143 216 ntBASIC13□□□□□ -0.33
MTHFRP42898 SLC16A1-AS1-207ENST00000627431 1073 ntTSL 5 BASIC13□□□□□ -0.33
MTHFRP42898 AL669831.6-201ENST00000635557 837 ntBASIC13□□□□□ -0.33
MTHFRP42898 AC012442.3-201ENST00000636053 940 ntTSL 5 BASIC13□□□□□ -0.33
MTHFRP42898 AL137785.1-201ENST00000637466 490 ntTSL 5 BASIC13□□□□□ -0.33
MTHFRP42898 OFD1-201ENST00000340096 3611 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
MTHFRP42898 MCRIP1-212ENST00000576730 2979 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
MTHFRP42898 ABLIM2-206ENST00000447017 2902 ntAPPRIS P4 TSL 1 (best) BASIC13□□□□□ -0.33
MTHFRP42898 CACNA1G-222ENST00000510366 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
MTHFRP42898 CACNA1G-227ENST00000513964 6735 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
MTHFRP42898 TMEM30A-203ENST00000475111 2791 ntTSL 1 (best) BASIC13□□□□□ -0.33
MTHFRP42898 ACO2-201ENST00000216254 2741 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
MTHFRP42898 FANCC-210ENST00000490972 2709 ntTSL 1 (best) BASIC13□□□□□ -0.33
MTHFRP42898 AC008764.8-201ENST00000623966 2717 ntBASIC13□□□□□ -0.33
MTHFRP42898 C1R-209ENST00000542285 2660 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
MTHFRP42898 TTC4-201ENST00000371281 2395 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
MTHFRP42898 CACNB1-202ENST00000394303 3742 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
MTHFRP42898 SAMD4A-201ENST00000251091 6565 ntTSL 1 (best) BASIC13□□□□□ -0.33
MTHFRP42898 NDUFAF7-201ENST00000002125 2176 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
MTHFRP42898 AL162391.1-201ENST00000419853 2102 ntTSL 1 (best) BASIC13□□□□□ -0.33
MTHFRP42898 CYLD-214ENST00000569418 3513 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
MTHFRP42898 GPR12-201ENST00000381436 1981 ntAPPRIS P1 BASIC13□□□□□ -0.33
MTHFRP42898 CDK5RAP3-202ENST00000536708 1975 ntTSL 2 BASIC13□□□□□ -0.33
MTHFRP42898 NR3C1-204ENST00000394466 3245 ntAPPRIS ALT1 TSL 5 BASIC13□□□□□ -0.33
MTHFRP42898 MANBAL-201ENST00000373605 1915 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
MTHFRP42898 NONO-203ENST00000373856 1921 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
MTHFRP42898 AL353608.3-202ENST00000429953 4384 ntTSL 5 BASIC12.99□□□□□ -0.33
MTHFRP42898 TROVE2-208ENST00000432079 7848 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
MTHFRP42898 USP2-AS1-202ENST00000500970 1784 ntTSL 2 BASIC12.99□□□□□ -0.33
MTHFRP42898 AFG3L2P1-201ENST00000521792 1763 ntBASIC12.99□□□□□ -0.33
MTHFRP42898 ITGAL-201ENST00000356798 5213 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
MTHFRP42898 LIN28A-202ENST00000326279 4008 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
MTHFRP42898 STRA6-222ENST00000616000 2843 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
MTHFRP42898 GNPNAT1-201ENST00000216410 3860 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
MTHFRP42898 MCL1-204ENST00000620947 3626 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
MTHFRP42898 PCYT1A-206ENST00000431016 1482 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
MTHFRP42898 ETAA1-201ENST00000272342 3418 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
MTHFRP42898 PARP10-205ENST00000525773 3404 ntAPPRIS ALT2 TSL 2 BASIC12.99□□□□□ -0.33
MTHFRP42898 ZNF771-204ENST00000566625 2415 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
MTHFRP42898 GRAMD4-201ENST00000361034 4315 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
MTHFRP42898 TSPAN9-206ENST00000537971 4284 ntAPPRIS P1 TSL 3 BASIC12.99□□□□□ -0.33
MTHFRP42898 PRAMENP-203ENST00000548391 1445 ntBASIC12.99□□□□□ -0.33
MTHFRP42898 NLRP7-201ENST00000328092 3299 ntAPPRIS P3 TSL 5 BASIC12.99□□□□□ -0.33
MTHFRP42898 HLCS-201ENST00000336648 6010 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
MTHFRP42898 CACNA1G-209ENST00000502264 6921 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
MTHFRP42898 CACNA1G-221ENST00000510115 6912 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
MTHFRP42898 DGKZ-204ENST00000454345 4086 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
MTHFRP42898 CDK5-201ENST00000297518 783 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
MTHFRP42898 OR2B11-201ENST00000318749 1054 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
MTHFRP42898 RARRES3-202ENST00000354445 696 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
MTHFRP42898 CD72-203ENST00000378431 849 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
MTHFRP42898 IGLV3-22-201ENST00000390307 409 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
MTHFRP42898 OR10AA1P-201ENST00000417823 937 ntBASIC12.99□□□□□ -0.33
MTHFRP42898 RPL10P12-201ENST00000427342 318 ntBASIC12.99□□□□□ -0.33
MTHFRP42898 AL121983.2-204ENST00000430592 448 ntTSL 3 BASIC12.99□□□□□ -0.33
MTHFRP42898 HS1BP3-IT1-201ENST00000449391 600 ntTSL 2 BASIC12.99□□□□□ -0.33
MTHFRP42898 RN7SL328P-201ENST00000484033 300 ntBASIC12.99□□□□□ -0.33
MTHFRP42898 AC113391.1-201ENST00000507236 578 ntTSL 4 BASIC12.99□□□□□ -0.33
MTHFRP42898 DHRS7-202ENST00000536410 1194 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
MTHFRP42898 CACNA1C-AS1-203ENST00000544517 742 ntTSL 4 BASIC12.99□□□□□ -0.33
MTHFRP42898 AL354993.2-201ENST00000558738 542 ntTSL 4 BASIC12.99□□□□□ -0.33
MTHFRP42898 AC010601.1-201ENST00000569048 446 ntTSL 5 BASIC12.99□□□□□ -0.33
MTHFRP42898 ACAP1-204ENST00000570504 274 ntTSL 3 BASIC12.99□□□□□ -0.33
MTHFRP42898 MIR6770-3-201ENST00000616362 60 ntBASIC12.99□□□□□ -0.33
MTHFRP42898 MIR6770-2-201ENST00000618304 60 ntBASIC12.99□□□□□ -0.33
MTHFRP42898 pRNA.4-201ENST00000620973 89 ntBASIC12.99□□□□□ -0.33
MTHFRP42898 MIR6770-1-201ENST00000622248 60 ntBASIC12.99□□□□□ -0.33
MTHFRP42898 AC138907.9-201ENST00000623747 986 ntBASIC12.99□□□□□ -0.33
MTHFRP42898 YIPF6-201ENST00000374622 6134 ntTSL 2 BASIC12.99□□□□□ -0.33
MTHFRP42898 PDP1-202ENST00000396200 4358 ntAPPRIS ALT1 TSL 4 BASIC12.99□□□□□ -0.33
MTHFRP42898 VAV1-202ENST00000539284 2627 ntTSL 5 BASIC12.99□□□□□ -0.33
MTHFRP42898 ARHGEF9-220ENST00000635729 1761 ntTSL 5 BASIC12.99□□□□□ -0.33
MTHFRP42898 DAAM2-202ENST00000398904 6224 ntAPPRIS ALT1 TSL 5 BASIC12.99□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms