Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 CIRBP-AS1-201ENST00000585832 994 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
NPIPA3F8WFD2 BX510359.7-201ENST00000619819 630 ntBASIC11.39□□□□□ -0.59
NPIPA3F8WFD2 AP003900.1-201ENST00000622592 859 ntTSL 3 BASIC11.39□□□□□ -0.59
NPIPA3F8WFD2 NCS1-203ENST00000630865 1092 ntTSL 3 BASIC11.39□□□□□ -0.59
NPIPA3F8WFD2 AC006511.4-201ENST00000631571 561 ntTSL 3 BASIC11.39□□□□□ -0.59
NPIPA3F8WFD2 SOCS2-AS1-201ENST00000499137 3325 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
NPIPA3F8WFD2 MAD1L1-201ENST00000265854 2718 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
NPIPA3F8WFD2 INTS8-217ENST00000523731 4633 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
NPIPA3F8WFD2 RAB42-201ENST00000373826 1950 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
NPIPA3F8WFD2 GIMAP6-201ENST00000328902 3440 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
NPIPA3F8WFD2 STRA6-222ENST00000616000 2843 ntAPPRIS P1 TSL 2 BASIC11.39□□□□□ -0.59
NPIPA3F8WFD2 ACTR2-202ENST00000377982 2685 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
NPIPA3F8WFD2 LINC02202-201ENST00000499583 2664 ntTSL 2 BASIC11.39□□□□□ -0.59
NPIPA3F8WFD2 NUDCD3-202ENST00000355451 8256 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
NPIPA3F8WFD2 CEP41-201ENST00000223208 6513 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
NPIPA3F8WFD2 CCDC88A-214ENST00000621814 3089 ntTSL 5 BASIC11.39□□□□□ -0.59
NPIPA3F8WFD2 ACBD5-205ENST00000396271 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
NPIPA3F8WFD2 SEPT3-202ENST00000396425 4649 ntAPPRIS ALT1 TSL 1 (best) BASIC11.39□□□□□ -0.59
NPIPA3F8WFD2 SHMT2-205ENST00000553474 1765 ntTSL 2 BASIC11.39□□□□□ -0.59
NPIPA3F8WFD2 ALDH3B2-204ENST00000530069 2480 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
NPIPA3F8WFD2 RGL1-202ENST00000360851 4724 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
NPIPA3F8WFD2 ELMOD3-202ENST00000393852 2332 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
NPIPA3F8WFD2 ZFAT-202ENST00000429442 4421 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
NPIPA3F8WFD2 CACNA2D4-209ENST00000538450 1498 ntTSL 2 BASIC11.38□□□□□ -0.59
NPIPA3F8WFD2 AC134772.2-202ENST00000634384 3585 ntTSL 2 BASIC11.38□□□□□ -0.59
NPIPA3F8WFD2 MDM1-203ENST00000393543 2718 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
NPIPA3F8WFD2 AC073585.1-201ENST00000368895 1328 ntBASIC11.38□□□□□ -0.59
NPIPA3F8WFD2 AL627309.3-201ENST00000495576 1319 ntTSL 5 BASIC11.38□□□□□ -0.59
NPIPA3F8WFD2 ARL13B-201ENST00000303097 3264 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
NPIPA3F8WFD2 FIBCD1-202ENST00000372338 3253 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
NPIPA3F8WFD2 TAOK2-201ENST00000279394 4246 ntAPPRIS ALT1 TSL 1 (best) BASIC11.38□□□□□ -0.59
NPIPA3F8WFD2 SYBU-204ENST00000408908 2983 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
NPIPA3F8WFD2 MCRIP1-212ENST00000576730 2979 ntAPPRIS P1 TSL 2 BASIC11.38□□□□□ -0.59
NPIPA3F8WFD2 ZBTB20-206ENST00000464560 2816 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
NPIPA3F8WFD2 BAIAP3-204ENST00000426824 3930 ntAPPRIS ALT2 TSL 2 BASIC11.38□□□□□ -0.59
NPIPA3F8WFD2 FAM84A-202ENST00000331243 3765 ntAPPRIS P1 TSL 3 BASIC11.38□□□□□ -0.59
NPIPA3F8WFD2 TROVE2-206ENST00000400968 2143 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
NPIPA3F8WFD2 KLHDC2-211ENST00000557247 1565 ntTSL 5 BASIC11.38□□□□□ -0.59
NPIPA3F8WFD2 AC099489.1-203ENST00000598234 10568 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
NPIPA3F8WFD2 PDHA1-206ENST00000422285 3310 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
NPIPA3F8WFD2 GPR37L1-201ENST00000367282 6588 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
NPIPA3F8WFD2 AC053503.6-201ENST00000623864 1843 ntBASIC11.38□□□□□ -0.59
NPIPA3F8WFD2 IP6K3-201ENST00000293756 2610 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
NPIPA3F8WFD2 RP2-201ENST00000218340 3803 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
NPIPA3F8WFD2 AL133517.1-201ENST00000413412 748 ntBASIC11.38□□□□□ -0.59
NPIPA3F8WFD2 AC105446.1-201ENST00000441882 407 ntTSL 3 BASIC11.38□□□□□ -0.59
NPIPA3F8WFD2 AC069421.1-201ENST00000447462 323 ntBASIC11.38□□□□□ -0.59
NPIPA3F8WFD2 HNRNPA1P9-201ENST00000450624 950 ntBASIC11.38□□□□□ -0.59
NPIPA3F8WFD2 VEGFA-210ENST00000457104 414 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
NPIPA3F8WFD2 HAX1-204ENST00000457918 914 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
NPIPA3F8WFD2 AC104445.1-201ENST00000460597 749 ntTSL 3 BASIC11.38□□□□□ -0.59
NPIPA3F8WFD2 VEGFA-218ENST00000518689 630 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
NPIPA3F8WFD2 WISP1-205ENST00000519433 545 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
NPIPA3F8WFD2 VEGFA-223ENST00000523125 541 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
NPIPA3F8WFD2 AC051619.6-201ENST00000558039 595 ntTSL 4 BASIC11.38□□□□□ -0.59
NPIPA3F8WFD2 AC013356.4-201ENST00000558421 482 ntTSL 2 BASIC11.38□□□□□ -0.59
NPIPA3F8WFD2 MT1L-201ENST00000565768 411 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
NPIPA3F8WFD2 MIR22HG-206ENST00000573127 899 ntTSL 3 BASIC11.38□□□□□ -0.59
NPIPA3F8WFD2 AC015818.3-201ENST00000583797 589 ntBASIC11.38□□□□□ -0.59
NPIPA3F8WFD2 FAM32A-204ENST00000588367 798 ntTSL 2 BASIC11.38□□□□□ -0.59
NPIPA3F8WFD2 SMIM22-207ENST00000589721 822 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
NPIPA3F8WFD2 AC011479.2-201ENST00000598146 432 ntTSL 3 BASIC11.38□□□□□ -0.59
NPIPA3F8WFD2 AC010326.4-202ENST00000603829 541 ntBASIC11.38□□□□□ -0.59
NPIPA3F8WFD2 AC010326.4-201ENST00000604665 891 ntBASIC11.38□□□□□ -0.59
NPIPA3F8WFD2 AC242988.1-201ENST00000611044 714 ntTSL 3 BASIC11.38□□□□□ -0.59
NPIPA3F8WFD2 RDM1-216ENST00000613308 779 ntAPPRIS ALT2 TSL 3 BASIC11.38□□□□□ -0.59
NPIPA3F8WFD2 LINC00963-217ENST00000624009 663 ntTSL 5 BASIC11.38□□□□□ -0.59
NPIPA3F8WFD2 AC116631.1-201ENST00000640685 576 ntTSL 5 BASIC11.38□□□□□ -0.59
NPIPA3F8WFD2 ZMYND11-203ENST00000381591 4229 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
NPIPA3F8WFD2 NEK11-213ENST00000511262 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
NPIPA3F8WFD2 KCNK10-202ENST00000319231 2725 ntAPPRIS P4 TSL 1 (best) BASIC11.38□□□□□ -0.59
NPIPA3F8WFD2 PCSK2-202ENST00000377899 4674 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
NPIPA3F8WFD2 ASB2-203ENST00000555019 2842 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
NPIPA3F8WFD2 PIK3R5-216ENST00000584803 2653 ntAPPRIS ALT1 TSL 5 BASIC11.38□□□□□ -0.59
NPIPA3F8WFD2 S1PR1-201ENST00000305352 2909 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
NPIPA3F8WFD2 CCT7P1-201ENST00000406551 1611 ntBASIC11.38□□□□□ -0.59
NPIPA3F8WFD2 CA10-202ENST00000442502 2935 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
NPIPA3F8WFD2 CDK5RAP1-201ENST00000339269 1891 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
NPIPA3F8WFD2 GOLGA8Q-201ENST00000562783 1899 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
NPIPA3F8WFD2 GUCY2D-201ENST00000254854 3698 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
NPIPA3F8WFD2 PRRT2-201ENST00000300797 3002 ntTSL 2 BASIC11.38□□□□□ -0.59
NPIPA3F8WFD2 STAT6-202ENST00000454075 3037 ntAPPRIS P1 TSL 2 BASIC11.38□□□□□ -0.59
NPIPA3F8WFD2 NPC1L1-204ENST00000546276 4826 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
NPIPA3F8WFD2 GREB1-204ENST00000381486 8484 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
NPIPA3F8WFD2 ANKRD13A-201ENST00000261739 4148 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
NPIPA3F8WFD2 RBM4-202ENST00000396053 1337 ntTSL 2 BASIC11.37□□□□□ -0.59
NPIPA3F8WFD2 RPL23A-204ENST00000422514 1562 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
NPIPA3F8WFD2 GLDC-216ENST00000639639 1559 ntTSL 3 BASIC11.37□□□□□ -0.59
NPIPA3F8WFD2 AC126323.1-203ENST00000562306 2579 ntBASIC11.37□□□□□ -0.59
NPIPA3F8WFD2 BCAR1-203ENST00000393422 4064 ntAPPRIS ALT2 TSL 2 BASIC11.37□□□□□ -0.59
NPIPA3F8WFD2 LOXL4-201ENST00000260702 3653 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
NPIPA3F8WFD2 TAF1C-201ENST00000341690 3678 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
NPIPA3F8WFD2 KDM2B-219ENST00000611216 3434 ntTSL 5 BASIC11.37□□□□□ -0.59
NPIPA3F8WFD2 GRM2-202ENST00000395052 3151 ntAPPRIS P1 TSL 2 BASIC11.37□□□□□ -0.59
NPIPA3F8WFD2 HIVEP1-201ENST00000379388 9027 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
NPIPA3F8WFD2 HIVEP1-208ENST00000541134 9023 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
NPIPA3F8WFD2 HSD3B1-201ENST00000369413 1676 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
NPIPA3F8WFD2 LINC02188-202ENST00000569740 3775 ntTSL 4 BASIC11.37□□□□□ -0.59
NPIPA3F8WFD2 DRAM1-201ENST00000258534 3519 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
NPIPA3F8WFD2 TTC14-202ENST00000382584 2274 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Retrieved 100 of 98,524 protein–RNA pairs in 82.5 ms