Protein–RNA interactions for Protein: Q2TBC4

PRICKLE4, Prickle-like protein 4, humanhuman

Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE4Q2TBC4 AC106774.5-201ENST00000640558 597 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
PRICKLE4Q2TBC4 AC233724.18-201ENST00000640803 597 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
PRICKLE4Q2TBC4 AC233724.21-201ENST00000640846 597 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
PRICKLE4Q2TBC4 SPOCK3-203ENST00000421836 3061 ntAPPRIS ALT2 TSL 2 BASIC11.54□□□□□ -0.56
PRICKLE4Q2TBC4 FAM131B-202ENST00000409346 4295 ntAPPRIS P3 TSL 5 BASIC11.54□□□□□ -0.56
PRICKLE4Q2TBC4 RRBP1-201ENST00000246043 4737 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
PRICKLE4Q2TBC4 ZFYVE27-201ENST00000337540 2927 ntTSL 2 BASIC11.54□□□□□ -0.56
PRICKLE4Q2TBC4 PABPC1-219ENST00000522387 2331 ntTSL 2 BASIC11.54□□□□□ -0.56
PRICKLE4Q2TBC4 RABL2B-201ENST00000354869 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
PRICKLE4Q2TBC4 LINC00473-204ENST00000584179 1717 ntTSL 5 BASIC11.54□□□□□ -0.56
PRICKLE4Q2TBC4 NFE2L1-203ENST00000362042 4774 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
PRICKLE4Q2TBC4 FAM9A-201ENST00000381003 1519 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
PRICKLE4Q2TBC4 FAM160A1-201ENST00000435205 4576 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
PRICKLE4Q2TBC4 IMPDH1P5-201ENST00000439688 1540 ntBASIC11.54□□□□□ -0.56
PRICKLE4Q2TBC4 LINC02188-202ENST00000569740 3775 ntTSL 4 BASIC11.54□□□□□ -0.56
PRICKLE4Q2TBC4 PER3-201ENST00000361923 6203 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
PRICKLE4Q2TBC4 IQSEC1-204ENST00000613206 3582 ntTSL 2 BASIC11.54□□□□□ -0.56
PRICKLE4Q2TBC4 RNF216-205ENST00000425013 5639 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
PRICKLE4Q2TBC4 ZNF542P-207ENST00000495307 3393 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
PRICKLE4Q2TBC4 ZNF789-209ENST00000483089 2994 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
PRICKLE4Q2TBC4 CSF3R-201ENST00000331941 2375 ntTSL 5 BASIC11.54□□□□□ -0.56
PRICKLE4Q2TBC4 ALDH8A1-203ENST00000367845 2383 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
PRICKLE4Q2TBC4 THAP1-201ENST00000254250 2161 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
PRICKLE4Q2TBC4 EPB41L1-206ENST00000373950 3631 ntTSL 5 BASIC11.54□□□□□ -0.56
PRICKLE4Q2TBC4 ADGRE2-205ENST00000594076 2193 ntTSL 5 BASIC11.54□□□□□ -0.56
PRICKLE4Q2TBC4 CSF2RA-208ENST00000417535 1955 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
PRICKLE4Q2TBC4 RNF43-201ENST00000407977 5516 ntAPPRIS P1 TSL 2 BASIC11.54□□□□□ -0.56
PRICKLE4Q2TBC4 AC100868.1-201ENST00000262283 2413 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
PRICKLE4Q2TBC4 TMEM159-203ENST00000451578 1378 ntTSL 2 BASIC11.54□□□□□ -0.56
PRICKLE4Q2TBC4 CHD4-211ENST00000544484 6554 ntTSL 2 BASIC11.53□□□□□ -0.56
PRICKLE4Q2TBC4 ZBTB7B-203ENST00000417934 4017 ntAPPRIS ALT2 TSL 2 BASIC11.53□□□□□ -0.56
PRICKLE4Q2TBC4 ARRDC3-AS1-201ENST00000625713 2500 ntTSL 2 BASIC11.53□□□□□ -0.56
PRICKLE4Q2TBC4 PTPRN-202ENST00000409251 3622 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
PRICKLE4Q2TBC4 GNPDA1-210ENST00000508177 2980 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
PRICKLE4Q2TBC4 GAL3ST4-203ENST00000413800 2334 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
PRICKLE4Q2TBC4 GRK7-201ENST00000264952 3239 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
PRICKLE4Q2TBC4 USP19-202ENST00000398888 4559 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
PRICKLE4Q2TBC4 WASH2P-201ENST00000453662 1684 ntBASIC11.53□□□□□ -0.56
PRICKLE4Q2TBC4 TUBE1-202ENST00000368662 2142 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
PRICKLE4Q2TBC4 IQUB-202ENST00000466202 3296 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
PRICKLE4Q2TBC4 PRPSAP2-228ENST00000610773 1905 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
PRICKLE4Q2TBC4 LINC01561-201ENST00000369071 2176 ntBASIC11.53□□□□□ -0.56
PRICKLE4Q2TBC4 RTL10-202ENST00000405640 6785 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
PRICKLE4Q2TBC4 JDP2-203ENST00000435893 5401 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
PRICKLE4Q2TBC4 ARHGAP36-202ENST00000370921 2447 ntTSL 2 BASIC11.53□□□□□ -0.56
PRICKLE4Q2TBC4 REPS1-205ENST00000415951 2424 ntTSL 5 BASIC11.53□□□□□ -0.56
PRICKLE4Q2TBC4 AGO2-205ENST00000519980 3141 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
PRICKLE4Q2TBC4 FXYD2-202ENST00000292079 571 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
PRICKLE4Q2TBC4 SYCE1-201ENST00000303903 1011 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
PRICKLE4Q2TBC4 APTX-203ENST00000379813 1121 ntTSL 5 BASIC11.53□□□□□ -0.56
PRICKLE4Q2TBC4 IFNA2-201ENST00000380206 1135 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
PRICKLE4Q2TBC4 HNRNPA1P58-201ENST00000403629 610 ntBASIC11.53□□□□□ -0.56
PRICKLE4Q2TBC4 AC074389.2-201ENST00000421380 437 ntTSL 3 BASIC11.53□□□□□ -0.56
PRICKLE4Q2TBC4 LINC01366-201ENST00000436248 983 ntTSL 3 BASIC11.53□□□□□ -0.56
PRICKLE4Q2TBC4 CYP4F60P-201ENST00000439449 549 ntBASIC11.53□□□□□ -0.56
PRICKLE4Q2TBC4 DLGAP4-AS1-203ENST00000439595 1207 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
PRICKLE4Q2TBC4 AL139011.1-201ENST00000442130 557 ntTSL 2 BASIC11.53□□□□□ -0.56
PRICKLE4Q2TBC4 AC118553.1-201ENST00000454219 655 ntTSL 2 BASIC11.53□□□□□ -0.56
PRICKLE4Q2TBC4 APTX-220ENST00000476858 1068 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
PRICKLE4Q2TBC4 AC068858.1-201ENST00000525114 1239 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
PRICKLE4Q2TBC4 ZNF7-209ENST00000529819 513 ntTSL 4 BASIC11.53□□□□□ -0.56
PRICKLE4Q2TBC4 GLIPR1L2-203ENST00000547164 509 ntTSL 5 BASIC11.53□□□□□ -0.56
PRICKLE4Q2TBC4 IGHV2OR16-5-201ENST00000567458 358 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
PRICKLE4Q2TBC4 EIF5AP2-201ENST00000585668 1047 ntBASIC11.53□□□□□ -0.56
PRICKLE4Q2TBC4 AC092634.5-206ENST00000593670 812 ntTSL 5 BASIC11.53□□□□□ -0.56
PRICKLE4Q2TBC4 PLA2G4C-AS1-203ENST00000601950 454 ntTSL 3 BASIC11.53□□□□□ -0.56
PRICKLE4Q2TBC4 SKINT1L-204ENST00000604015 540 ntTSL 4 BASIC11.53□□□□□ -0.56
PRICKLE4Q2TBC4 AC084018.1-201ENST00000609067 572 ntTSL 4 BASIC11.53□□□□□ -0.56
PRICKLE4Q2TBC4 AP000892.2-201ENST00000613535 324 ntBASIC11.53□□□□□ -0.56
PRICKLE4Q2TBC4 AL391669.1-201ENST00000619829 285 ntBASIC11.53□□□□□ -0.56
PRICKLE4Q2TBC4 AL513478.2-202ENST00000621949 835 ntTSL 3 BASIC11.53□□□□□ -0.56
PRICKLE4Q2TBC4 AL353658.2-201ENST00000629794 519 ntTSL 5 BASIC11.53□□□□□ -0.56
PRICKLE4Q2TBC4 CASP16P-204ENST00000635032 809 ntBASIC11.53□□□□□ -0.56
PRICKLE4Q2TBC4 SLC35A4-203ENST00000612662 2657 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
PRICKLE4Q2TBC4 PPFIA4-210ENST00000599966 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
PRICKLE4Q2TBC4 ALKBH5-201ENST00000399138 2748 ntAPPRIS P1 TSL 2 BASIC11.53□□□□□ -0.56
PRICKLE4Q2TBC4 UBP1-204ENST00000447368 3669 ntAPPRIS ALT1 TSL 2 BASIC11.53□□□□□ -0.56
PRICKLE4Q2TBC4 C1orf216-201ENST00000270815 3218 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
PRICKLE4Q2TBC4 MCC-201ENST00000302475 8257 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
PRICKLE4Q2TBC4 DMAC1-201ENST00000358227 2755 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
PRICKLE4Q2TBC4 ANXA13-201ENST00000262219 1588 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
PRICKLE4Q2TBC4 LINC00442-202ENST00000456737 2063 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
PRICKLE4Q2TBC4 COL3A1-201ENST00000304636 5543 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
PRICKLE4Q2TBC4 RANBP17-219ENST00000523189 4588 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
PRICKLE4Q2TBC4 ADARB1-214ENST00000629643 4583 ntTSL 5 BASIC11.53□□□□□ -0.56
PRICKLE4Q2TBC4 RAI2-202ENST00000360011 2377 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
PRICKLE4Q2TBC4 CMTR2-202ENST00000434935 4104 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
PRICKLE4Q2TBC4 COL22A1-203ENST00000435777 4355 ntAPPRIS ALT2 TSL 2 BASIC11.53□□□□□ -0.56
PRICKLE4Q2TBC4 WAPL-206ENST00000618527 6152 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
PRICKLE4Q2TBC4 WSCD2-201ENST00000332082 4710 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
PRICKLE4Q2TBC4 SCN1B-202ENST00000415950 4537 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
PRICKLE4Q2TBC4 COL1A2-213ENST00000620463 4523 ntTSL 5 BASIC11.52□□□□□ -0.56
PRICKLE4Q2TBC4 SPCS2-209ENST00000610881 2711 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.56
PRICKLE4Q2TBC4 SLC8B1-213ENST00000552014 3289 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
PRICKLE4Q2TBC4 SEMA4D-212ENST00000450295 5684 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
PRICKLE4Q2TBC4 AFF1-201ENST00000307808 9390 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.56
PRICKLE4Q2TBC4 PLAT-202ENST00000352041 2516 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
PRICKLE4Q2TBC4 ARHGAP24-203ENST00000395184 4661 ntAPPRIS P1 TSL 2 BASIC11.52□□□□□ -0.56
PRICKLE4Q2TBC4 RANGAP1-201ENST00000356244 3060 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
PRICKLE4Q2TBC4 NUP93-220ENST00000569842 2834 ntTSL 5 BASIC11.52□□□□□ -0.56
Retrieved 100 of 98,524 protein–RNA pairs in 105.9 ms