Protein–RNA interactions for Protein: O60939

SCN2B, Sodium channel subunit beta-2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2BO60939 SERPING1-213ENST00000619430 634 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
SCN2BO60939 AC007622.2-202ENST00000546714 1680 ntTSL 2 BASIC11.89□□□□□ -0.51
SCN2BO60939 GDPD2-205ENST00000538649 2067 ntTSL 2 BASIC11.89□□□□□ -0.51
SCN2BO60939 DYNC1I1-204ENST00000437599 2895 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
SCN2BO60939 SOX30-201ENST00000265007 3265 ntAPPRIS P4 TSL 1 (best) BASIC11.89□□□□□ -0.51
SCN2BO60939 MARCH5-201ENST00000358935 3926 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
SCN2BO60939 HTD2-205ENST00000477305 1531 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
SCN2BO60939 HERC6-201ENST00000264346 3779 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
SCN2BO60939 PNPLA8-208ENST00000453144 3366 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
SCN2BO60939 PRKG2-201ENST00000264399 4822 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
SCN2BO60939 TKT-203ENST00000423525 2831 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
SCN2BO60939 BGN-201ENST00000331595 2402 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
SCN2BO60939 MORC2-202ENST00000397641 5181 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
SCN2BO60939 CDC14A-201ENST00000336454 4137 ntAPPRIS ALT1 TSL 1 (best) BASIC11.89□□□□□ -0.51
SCN2BO60939 CASP7-201ENST00000345633 2659 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
SCN2BO60939 NANP-201ENST00000304788 3964 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
SCN2BO60939 EZR-203ENST00000392177 2933 ntAPPRIS ALT1 TSL 5 BASIC11.89□□□□□ -0.51
SCN2BO60939 TNFSF10-202ENST00000420541 1619 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
SCN2BO60939 PRPF40B-202ENST00000380281 3154 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
SCN2BO60939 TMTC4-201ENST00000328767 2101 ntTSL 2 BASIC11.89□□□□□ -0.51
SCN2BO60939 ZNF266-206ENST00000592292 3100 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
SCN2BO60939 DNM1P41-201ENST00000623634 3350 ntBASIC11.88□□□□□ -0.51
SCN2BO60939 UHRF1-206ENST00000622802 3230 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
SCN2BO60939 AC010422.6-201ENST00000593682 5857 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
SCN2BO60939 PKM-202ENST00000335181 2318 ntAPPRIS ALT1 TSL 1 (best) BASIC11.88□□□□□ -0.51
SCN2BO60939 G2E3-202ENST00000438909 2334 ntTSL 2 BASIC11.88□□□□□ -0.51
SCN2BO60939 PGGHG-202ENST00000409479 3062 ntTSL 5 BASIC11.88□□□□□ -0.51
SCN2BO60939 NLRP2-214ENST00000543010 3576 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
SCN2BO60939 ACIN1-213ENST00000555053 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
SCN2BO60939 DCAF11-203ENST00000396941 2402 ntTSL 2 BASIC11.88□□□□□ -0.51
SCN2BO60939 QARS-202ENST00000414533 2412 ntTSL 2 BASIC11.88□□□□□ -0.51
SCN2BO60939 NDRG4-204ENST00000394282 3626 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
SCN2BO60939 NUP62-201ENST00000352066 2870 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
SCN2BO60939 MMP7-201ENST00000260227 1125 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
SCN2BO60939 OTOS-201ENST00000319460 566 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
SCN2BO60939 AP000487.2-201ENST00000324630 394 ntTSL 3 BASIC11.88□□□□□ -0.51
SCN2BO60939 FCN2-202ENST00000350339 943 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
SCN2BO60939 LST1-204ENST00000376086 554 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
SCN2BO60939 PCSK2-202ENST00000377899 4674 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
SCN2BO60939 AIPL1-203ENST00000381129 2959 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
SCN2BO60939 COLEC11-204ENST00000402794 1134 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
SCN2BO60939 AC105443.1-201ENST00000433754 712 ntBASIC11.88□□□□□ -0.51
SCN2BO60939 TMEM14B-215ENST00000481240 1032 ntTSL 2 BASIC11.88□□□□□ -0.51
SCN2BO60939 DMKN-256ENST00000492341 738 ntAPPRIS ALT2 TSL 2 BASIC11.88□□□□□ -0.51
SCN2BO60939 AC026410.1-201ENST00000507366 1101 ntBASIC11.88□□□□□ -0.51
SCN2BO60939 SEPHS2P1-201ENST00000511618 1162 ntBASIC11.88□□□□□ -0.51
SCN2BO60939 TRAPPC4-212ENST00000533058 1209 ntTSL 2 BASIC11.88□□□□□ -0.51
SCN2BO60939 AC023051.2-201ENST00000541141 460 ntBASIC11.88□□□□□ -0.51
SCN2BO60939 MYL6-210ENST00000548400 573 ntTSL 3 BASIC11.88□□□□□ -0.51
SCN2BO60939 ZG16B-204ENST00000572863 716 ntAPPRIS ALT2 TSL 2 BASIC11.88□□□□□ -0.51
SCN2BO60939 INCA1-202ENST00000574617 1260 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
SCN2BO60939 INCA1-204ENST00000576820 973 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
SCN2BO60939 AC022146.2-201ENST00000605980 348 ntTSL 3 BASIC11.88□□□□□ -0.51
SCN2BO60939 AC130456.7-201ENST00000623838 1256 ntBASIC11.88□□□□□ -0.51
SCN2BO60939 AC148477.9-201ENST00000623974 539 ntBASIC11.88□□□□□ -0.51
SCN2BO60939 LUC7L3-223ENST00000625349 408 ntTSL 2 BASIC11.88□□□□□ -0.51
SCN2BO60939 AGPAT1-206ENST00000395499 2496 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
SCN2BO60939 FAM84A-202ENST00000331243 3765 ntAPPRIS P1 TSL 3 BASIC11.88□□□□□ -0.51
SCN2BO60939 LLGL2-205ENST00000577200 3192 ntAPPRIS ALT1 TSL 1 (best) BASIC11.88□□□□□ -0.51
SCN2BO60939 ZNRD1ASP-215ENST00000425604 1986 ntTSL 3 BASIC11.88□□□□□ -0.51
SCN2BO60939 IL18BP-201ENST00000260049 1354 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
SCN2BO60939 ANKRD20A8P-201ENST00000432432 3512 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
SCN2BO60939 PTPN7-202ENST00000367279 3265 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
SCN2BO60939 UCK1-202ENST00000372210 2051 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
SCN2BO60939 LINC01164-201ENST00000341866 3384 ntTSL 2 BASIC11.88□□□□□ -0.51
SCN2BO60939 AC100868.1-201ENST00000262283 2413 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
SCN2BO60939 HINFP-204ENST00000527410 1466 ntTSL 2 BASIC11.88□□□□□ -0.51
SCN2BO60939 NF2-204ENST00000361166 1837 ntAPPRIS ALT1 TSL 1 (best) BASIC11.88□□□□□ -0.51
SCN2BO60939 NEK6-205ENST00000394199 2535 ntTSL 2 BASIC11.88□□□□□ -0.51
SCN2BO60939 SYS1-201ENST00000243918 2862 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
SCN2BO60939 AKAP8-201ENST00000269701 3670 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
SCN2BO60939 CHST15-201ENST00000346248 4810 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
SCN2BO60939 RETREG3-201ENST00000309428 3759 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
SCN2BO60939 TBC1D3P5-203ENST00000586223 3083 ntTSL 2 BASIC11.88□□□□□ -0.51
SCN2BO60939 C3orf20-202ENST00000412910 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
SCN2BO60939 SEC14L1-202ENST00000430767 5283 ntAPPRIS P3 TSL 2 BASIC11.88□□□□□ -0.51
SCN2BO60939 DCAF4-203ENST00000394234 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
SCN2BO60939 FAM133B-204ENST00000445716 2026 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
SCN2BO60939 ZNF221-202ENST00000587682 2034 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
SCN2BO60939 ATAD5-201ENST00000321990 6869 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
SCN2BO60939 CALM1-216ENST00000626705 1341 ntTSL 5 BASIC11.87□□□□□ -0.51
SCN2BO60939 OTUD6B-201ENST00000285420 3298 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
SCN2BO60939 ANO1-207ENST00000530676 3289 ntAPPRIS ALT2 TSL 2 BASIC11.87□□□□□ -0.51
SCN2BO60939 UBE2V1-203ENST00000371674 2133 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
SCN2BO60939 TMEM132D-201ENST00000389441 5305 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
SCN2BO60939 FXR1-220ENST00000491062 1768 ntTSL 2 BASIC11.87□□□□□ -0.51
SCN2BO60939 NTM-206ENST00000427481 2583 ntTSL 5 BASIC11.87□□□□□ -0.51
SCN2BO60939 MSH6-213ENST00000614496 4150 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
SCN2BO60939 ZCCHC9-201ENST00000254037 4606 ntAPPRIS P1 TSL 2 BASIC11.87□□□□□ -0.51
SCN2BO60939 PABPC1L-207ENST00000372824 2223 ntTSL 2 BASIC11.87□□□□□ -0.51
SCN2BO60939 AC006037.2-201ENST00000622975 2232 ntBASIC11.87□□□□□ -0.51
SCN2BO60939 ALLC-201ENST00000252505 1446 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
SCN2BO60939 SCN8A-208ENST00000599343 5976 ntAPPRIS ALT1 TSL 5 BASIC11.87□□□□□ -0.51
SCN2BO60939 CPPED1-202ENST00000381774 6273 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
SCN2BO60939 AL050341.2-201ENST00000567508 1541 ntBASIC11.87□□□□□ -0.51
SCN2BO60939 KDM5B-203ENST00000367265 10345 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
SCN2BO60939 AC139099.1-202ENST00000574098 2409 ntBASIC11.87□□□□□ -0.51
SCN2BO60939 LINC00452-202ENST00000609661 2896 ntTSL 5 BASIC11.87□□□□□ -0.51
SCN2BO60939 GP1BA-201ENST00000329125 2501 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
SCN2BO60939 CACNA2D3-AS1-201ENST00000471265 2078 ntTSL 2 BASIC11.87□□□□□ -0.51
Retrieved 100 of 98,524 protein–RNA pairs in 76.5 ms