Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 TRO-202ENST00000319167 2326 ntAPPRIS ALT2 TSL 2 BASIC11.47□□□□□ -0.57
NPIPA3F8WFD2 TRO-203ENST00000375022 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
NPIPA3F8WFD2 ASPH-203ENST00000379454 5268 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
NPIPA3F8WFD2 PLEC-208ENST00000436759 14787 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
NPIPA3F8WFD2 GGTA1P-202ENST00000481534 3429 ntTSL 2 BASIC11.47□□□□□ -0.57
NPIPA3F8WFD2 HERC2P3-204ENST00000426501 5995 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
NPIPA3F8WFD2 PER1-202ENST00000354903 3115 ntTSL 2 BASIC11.46□□□□□ -0.57
NPIPA3F8WFD2 SNX1-211ENST00000560829 1869 ntTSL 5 BASIC11.46□□□□□ -0.57
NPIPA3F8WFD2 GPM6B-203ENST00000356942 1830 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
NPIPA3F8WFD2 AP5S1-205ENST00000615891 5362 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
NPIPA3F8WFD2 ABLIM2-213ENST00000514025 2974 ntTSL 2 BASIC11.46□□□□□ -0.57
NPIPA3F8WFD2 HJURP-207ENST00000441687 2934 ntAPPRIS ALT2 TSL 2 BASIC11.46□□□□□ -0.57
NPIPA3F8WFD2 PES1P1-201ENST00000508165 1736 ntBASIC11.46□□□□□ -0.57
NPIPA3F8WFD2 PDZRN3-208ENST00000479530 2778 ntTSL 2 BASIC11.46□□□□□ -0.57
NPIPA3F8WFD2 NNMT-201ENST00000299964 1610 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
NPIPA3F8WFD2 SEPT6-201ENST00000343984 2693 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
NPIPA3F8WFD2 SPTY2D1-201ENST00000336349 5754 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
NPIPA3F8WFD2 MKX-202ENST00000419761 3638 ntAPPRIS P1 TSL 2 BASIC11.46□□□□□ -0.57
NPIPA3F8WFD2 PKD1L2-210ENST00000533478 5669 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
NPIPA3F8WFD2 SPDYE16-203ENST00000633306 2591 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
NPIPA3F8WFD2 SHPRH-201ENST00000275233 6649 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.57
NPIPA3F8WFD2 IGSF11-202ENST00000393775 3495 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
NPIPA3F8WFD2 PLA2G4E-AS1-201ENST00000499478 2499 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
NPIPA3F8WFD2 ANP32B-201ENST00000339399 1463 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
NPIPA3F8WFD2 KRT8P15-201ENST00000425226 1451 ntBASIC11.46□□□□□ -0.57
NPIPA3F8WFD2 TRPC7-203ENST00000502753 2424 ntTSL 5 BASIC11.46□□□□□ -0.57
NPIPA3F8WFD2 DNAJB8-202ENST00000469083 3365 ntAPPRIS P1 TSL 2 BASIC11.46□□□□□ -0.57
NPIPA3F8WFD2 C1orf109-201ENST00000358011 2355 ntAPPRIS P1 TSL 2 BASIC11.46□□□□□ -0.57
NPIPA3F8WFD2 SPDYE8P-201ENST00000333385 2281 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
NPIPA3F8WFD2 SPDYE11-201ENST00000340073 2281 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
NPIPA3F8WFD2 SPDYE9P-203ENST00000575125 2281 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
NPIPA3F8WFD2 GLUL-204ENST00000417584 4065 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
NPIPA3F8WFD2 SPRY4-201ENST00000344120 4938 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
NPIPA3F8WFD2 PABPC1L-207ENST00000372824 2223 ntTSL 2 BASIC11.46□□□□□ -0.57
NPIPA3F8WFD2 NANP-201ENST00000304788 3964 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
NPIPA3F8WFD2 RPS3-209ENST00000527446 1306 ntAPPRIS P1 TSL 2 BASIC11.46□□□□□ -0.57
NPIPA3F8WFD2 MEST-206ENST00000416162 2158 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
NPIPA3F8WFD2 PIK3R6-204ENST00000619866 3041 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
NPIPA3F8WFD2 CTLA4-201ENST00000295854 525 ntTSL 5 BASIC11.46□□□□□ -0.57
NPIPA3F8WFD2 SFT2D2-202ENST00000367829 491 ntTSL 5 BASIC11.46□□□□□ -0.57
NPIPA3F8WFD2 CD27-AS1-201ENST00000399492 1094 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
NPIPA3F8WFD2 ZNF32-AS2-201ENST00000418966 905 ntTSL 5 BASIC11.46□□□□□ -0.57
NPIPA3F8WFD2 AC007312.1-201ENST00000427493 258 ntBASIC11.46□□□□□ -0.57
NPIPA3F8WFD2 HMGA1P2-201ENST00000430198 324 ntBASIC11.46□□□□□ -0.57
NPIPA3F8WFD2 AC008021.1-201ENST00000474180 414 ntBASIC11.46□□□□□ -0.57
NPIPA3F8WFD2 AC092944.1-204ENST00000475102 384 ntTSL 5 BASIC11.46□□□□□ -0.57
NPIPA3F8WFD2 AC069181.1-201ENST00000498256 554 ntBASIC11.46□□□□□ -0.57
NPIPA3F8WFD2 ST3GAL1P1-201ENST00000513810 1014 ntBASIC11.46□□□□□ -0.57
NPIPA3F8WFD2 LINC01606-208ENST00000521653 557 ntTSL 4 BASIC11.46□□□□□ -0.57
NPIPA3F8WFD2 RPL10P8-201ENST00000522888 313 ntBASIC11.46□□□□□ -0.57
NPIPA3F8WFD2 CYB561A3-213ENST00000539890 572 ntTSL 4 BASIC11.46□□□□□ -0.57
NPIPA3F8WFD2 ORMDL2-204ENST00000550836 438 ntTSL 3 BASIC11.46□□□□□ -0.57
NPIPA3F8WFD2 AC009950.1-210ENST00000594622 553 ntTSL 3 BASIC11.46□□□□□ -0.57
NPIPA3F8WFD2 AC063977.2-201ENST00000601996 421 ntBASIC11.46□□□□□ -0.57
NPIPA3F8WFD2 SKINT1L-204ENST00000604015 540 ntTSL 4 BASIC11.46□□□□□ -0.57
NPIPA3F8WFD2 ADIRF-AS1-203ENST00000609111 3822 ntTSL 2 BASIC11.46□□□□□ -0.57
NPIPA3F8WFD2 AC233280.19-201ENST00000633223 136 ntBASIC11.46□□□□□ -0.57
NPIPA3F8WFD2 AC005906.2-208ENST00000638655 1286 ntTSL 5 BASIC11.46□□□□□ -0.57
NPIPA3F8WFD2 NBN-203ENST00000409330 4523 ntTSL 5 BASIC11.46□□□□□ -0.57
NPIPA3F8WFD2 STRA6-201ENST00000323940 2864 ntAPPRIS P1 TSL 2 BASIC11.46□□□□□ -0.57
NPIPA3F8WFD2 GFRA1-203ENST00000369236 9109 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.58
NPIPA3F8WFD2 TRIM37-202ENST00000393065 3548 ntTSL 2 BASIC11.46□□□□□ -0.58
NPIPA3F8WFD2 WDR92-201ENST00000295121 2626 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
NPIPA3F8WFD2 GLIPR2-202ENST00000377960 1890 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
NPIPA3F8WFD2 LINC00355-201ENST00000456627 1878 ntTSL 2 BASIC11.46□□□□□ -0.58
NPIPA3F8WFD2 AL121827.1-201ENST00000370257 3264 ntTSL 2 BASIC11.46□□□□□ -0.58
NPIPA3F8WFD2 CASP8AP2-205ENST00000551025 6151 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
NPIPA3F8WFD2 USB1-207ENST00000563149 1751 ntTSL 2 BASIC11.46□□□□□ -0.58
NPIPA3F8WFD2 ABL2-207ENST00000507173 3177 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
NPIPA3F8WFD2 TENM3-204ENST00000511685 10896 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.58
NPIPA3F8WFD2 AC026992.2-203ENST00000563004 2419 ntBASIC11.46□□□□□ -0.58
NPIPA3F8WFD2 MAGEB1-202ENST00000397548 1708 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
NPIPA3F8WFD2 C19orf12-208ENST00000614091 4489 ntAPPRIS P1 TSL 4 BASIC11.46□□□□□ -0.58
NPIPA3F8WFD2 AC020912.1-201ENST00000638312 5059 ntTSL 5 BASIC11.46□□□□□ -0.58
NPIPA3F8WFD2 C3orf36-201ENST00000408895 1668 ntAPPRIS P1 BASIC11.46□□□□□ -0.58
NPIPA3F8WFD2 HOPX-211ENST00000554144 1672 ntTSL 5 BASIC11.46□□□□□ -0.58
NPIPA3F8WFD2 FBXO22-201ENST00000308275 10725 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
NPIPA3F8WFD2 AL138762.1-201ENST00000608554 1637 ntBASIC11.46□□□□□ -0.58
NPIPA3F8WFD2 USP11-204ENST00000377107 3515 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
NPIPA3F8WFD2 CCDC32-214ENST00000561011 1577 ntTSL 2 BASIC11.45□□□□□ -0.58
NPIPA3F8WFD2 PSMD5-201ENST00000210313 3443 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
NPIPA3F8WFD2 MAMLD1-201ENST00000262858 4607 ntAPPRIS P3 TSL 5 BASIC11.45□□□□□ -0.58
NPIPA3F8WFD2 SUCLG2-204ENST00000493112 1516 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
NPIPA3F8WFD2 ZNF44-202ENST00000355684 2119 ntAPPRIS P3 TSL 2 BASIC11.45□□□□□ -0.58
NPIPA3F8WFD2 SHOC2-202ENST00000369452 3943 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
NPIPA3F8WFD2 ANKRD36-201ENST00000420699 6269 ntAPPRIS P2 TSL 5 BASIC11.45□□□□□ -0.58
NPIPA3F8WFD2 TBC1D3B-202ENST00000611257 2081 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
NPIPA3F8WFD2 FAM184A-211ENST00000521531 3244 ntTSL 5 BASIC11.45□□□□□ -0.58
NPIPA3F8WFD2 AC068580.3-201ENST00000449248 2015 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
NPIPA3F8WFD2 FBRSL1-205ENST00000542061 3175 ntAPPRIS ALT2 TSL 2 BASIC11.45□□□□□ -0.58
NPIPA3F8WFD2 AC010422.6-201ENST00000593682 5857 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
NPIPA3F8WFD2 CCDC57-202ENST00000389641 3000 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
NPIPA3F8WFD2 CCDC57-206ENST00000392347 3000 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
NPIPA3F8WFD2 ACTN1-204ENST00000438964 3043 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
NPIPA3F8WFD2 TUBB8-207ENST00000568866 1367 ntTSL 5 BASIC11.45□□□□□ -0.58
NPIPA3F8WFD2 PLOD3-201ENST00000223127 2920 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
NPIPA3F8WFD2 LENG8-201ENST00000326764 3991 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
NPIPA3F8WFD2 AC099689.1-201ENST00000624383 1302 ntBASIC11.45□□□□□ -0.58
NPIPA3F8WFD2 AMBRA1-201ENST00000314845 5023 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
NPIPA3F8WFD2 TEX38-201ENST00000334122 866 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms