Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 OSGIN1-206ENST00000565123 833 ntTSL 2 BASIC11.48□□□□□ -0.57
NPIPA3F8WFD2 IGHV3OR16-11-201ENST00000565524 349 ntBASIC11.48□□□□□ -0.57
NPIPA3F8WFD2 SMIM28-201ENST00000573100 855 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
NPIPA3F8WFD2 MED11-203ENST00000575284 652 ntTSL 3 BASIC11.48□□□□□ -0.57
NPIPA3F8WFD2 NAT9-204ENST00000578822 839 ntTSL 3 BASIC11.48□□□□□ -0.57
NPIPA3F8WFD2 AC090093.1-201ENST00000611315 271 ntBASIC11.48□□□□□ -0.57
NPIPA3F8WFD2 IFI27-214ENST00000620396 599 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
NPIPA3F8WFD2 AC020763.2-201ENST00000623155 1255 ntBASIC11.48□□□□□ -0.57
NPIPA3F8WFD2 CBR3-AS1-210ENST00000623484 392 ntTSL 5 BASIC11.48□□□□□ -0.57
NPIPA3F8WFD2 AC138430.2-201ENST00000624068 504 ntBASIC11.48□□□□□ -0.57
NPIPA3F8WFD2 CBR3-AS1-215ENST00000624086 594 ntTSL 5 BASIC11.48□□□□□ -0.57
NPIPA3F8WFD2 FP671120.4-201ENST00000629969 923 ntBASIC11.48□□□□□ -0.57
NPIPA3F8WFD2 FAM95B1-201ENST00000455995 4236 ntTSL 2 BASIC11.48□□□□□ -0.57
NPIPA3F8WFD2 MAGEL2-201ENST00000532292 4298 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
NPIPA3F8WFD2 DDX6P2-201ENST00000619520 1455 ntBASIC11.48□□□□□ -0.57
NPIPA3F8WFD2 AC026725.1-201ENST00000511327 1588 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
NPIPA3F8WFD2 AC034238.1-214ENST00000609699 1590 ntTSL 5 BASIC11.48□□□□□ -0.57
NPIPA3F8WFD2 AL109615.2-201ENST00000455005 1608 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
NPIPA3F8WFD2 ACAA2-205ENST00000587994 1657 ntAPPRIS ALT1 TSL 5 BASIC11.48□□□□□ -0.57
NPIPA3F8WFD2 TP73-206ENST00000378288 5120 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
NPIPA3F8WFD2 CHRDL2-201ENST00000263671 1712 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
NPIPA3F8WFD2 GPHN-202ENST00000459628 1723 ntTSL 2 BASIC11.48□□□□□ -0.57
NPIPA3F8WFD2 RETREG3-203ENST00000585894 1733 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
NPIPA3F8WFD2 TBL1X-206ENST00000424279 5451 ntAPPRIS P1 TSL 2 BASIC11.48□□□□□ -0.57
NPIPA3F8WFD2 SPTLC1-201ENST00000262554 1894 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
NPIPA3F8WFD2 SLC5A4-201ENST00000266086 2030 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
NPIPA3F8WFD2 DDX5-210ENST00000578804 2021 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
NPIPA3F8WFD2 TRIM40-207ENST00000396581 2086 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
NPIPA3F8WFD2 PRAME-203ENST00000402697 2057 ntAPPRIS P2 TSL 5 BASIC11.48□□□□□ -0.57
NPIPA3F8WFD2 RPUSD4-208ENST00000533628 2053 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
NPIPA3F8WFD2 MATR3-233ENST00000504203 2243 ntTSL 2 BASIC11.48□□□□□ -0.57
NPIPA3F8WFD2 GNAL-203ENST00000423027 2255 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
NPIPA3F8WFD2 AC241952.1-201ENST00000612480 6897 ntBASIC11.48□□□□□ -0.57
NPIPA3F8WFD2 AP1M1-203ENST00000444449 2311 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
NPIPA3F8WFD2 FAM90A26-201ENST00000512047 2492 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
NPIPA3F8WFD2 MFSD11-201ENST00000336509 2538 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
NPIPA3F8WFD2 DGKZ-216ENST00000528615 2692 ntTSL 5 BASIC11.48□□□□□ -0.57
NPIPA3F8WFD2 NEXN-201ENST00000330010 3195 ntTSL 2 BASIC11.48□□□□□ -0.57
NPIPA3F8WFD2 PCDHB6-201ENST00000231136 3266 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
NPIPA3F8WFD2 APOBR-201ENST00000431282 3765 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
NPIPA3F8WFD2 APOBR-202ENST00000564831 3792 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
NPIPA3F8WFD2 CPNE4-201ENST00000429747 4184 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
NPIPA3F8WFD2 CSPG4P13-202ENST00000567704 4801 ntBASIC11.47□□□□□ -0.57
NPIPA3F8WFD2 SCAMP1-207ENST00000621999 4509 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
NPIPA3F8WFD2 FLT4-202ENST00000393347 4292 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
NPIPA3F8WFD2 KCNH1-202ENST00000367007 3445 ntTSL 5 BASIC11.47□□□□□ -0.57
NPIPA3F8WFD2 C10orf90-201ENST00000284694 3076 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
NPIPA3F8WFD2 STRA6-202ENST00000395105 2800 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
NPIPA3F8WFD2 VAV1-202ENST00000539284 2627 ntTSL 5 BASIC11.47□□□□□ -0.57
NPIPA3F8WFD2 ZNF274-210ENST00000610905 2559 ntAPPRIS P4 TSL 5 BASIC11.47□□□□□ -0.57
NPIPA3F8WFD2 SHANK2-201ENST00000338508 7271 ntTSL 5 BASIC11.47□□□□□ -0.57
NPIPA3F8WFD2 AC000068.1-201ENST00000431090 2097 ntTSL 2 BASIC11.47□□□□□ -0.57
NPIPA3F8WFD2 ZNF629-201ENST00000262525 6087 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
NPIPA3F8WFD2 LINC00343-203ENST00000454555 1765 ntTSL 2 BASIC11.47□□□□□ -0.57
NPIPA3F8WFD2 KIR3DL3-201ENST00000291860 1691 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
NPIPA3F8WFD2 AL162615.1-201ENST00000429893 1653 ntBASIC11.47□□□□□ -0.57
NPIPA3F8WFD2 AC007598.3-201ENST00000623077 1678 ntBASIC11.47□□□□□ -0.57
NPIPA3F8WFD2 THEMIS3P-201ENST00000416112 1586 ntBASIC11.47□□□□□ -0.57
NPIPA3F8WFD2 ENOX2-201ENST00000338144 4263 ntTSL 2 BASIC11.47□□□□□ -0.57
NPIPA3F8WFD2 PCDHB11-201ENST00000354757 4198 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
NPIPA3F8WFD2 PCP2-201ENST00000311069 776 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
NPIPA3F8WFD2 TAGLN2-201ENST00000320307 709 ntAPPRIS P1 TSL 3 BASIC11.47□□□□□ -0.57
NPIPA3F8WFD2 SGCA-202ENST00000344627 1057 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
NPIPA3F8WFD2 SNX15-201ENST00000352068 771 ntTSL 5 BASIC11.47□□□□□ -0.57
NPIPA3F8WFD2 CST11-202ENST00000377009 554 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
NPIPA3F8WFD2 AC004884.1-201ENST00000393647 319 ntBASIC11.47□□□□□ -0.57
NPIPA3F8WFD2 GSTM2P1-201ENST00000405166 654 ntBASIC11.47□□□□□ -0.57
NPIPA3F8WFD2 KDM5C-IT1-201ENST00000412242 755 ntTSL 5 BASIC11.47□□□□□ -0.57
NPIPA3F8WFD2 CLK2P1-201ENST00000416636 1294 ntBASIC11.47□□□□□ -0.57
NPIPA3F8WFD2 CYP4F29P-202ENST00000428301 1279 ntTSL 2 BASIC11.47□□□□□ -0.57
NPIPA3F8WFD2 AL590399.1-204ENST00000430302 781 ntTSL 5 BASIC11.47□□□□□ -0.57
NPIPA3F8WFD2 IDI2-AS1-204ENST00000437374 896 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
NPIPA3F8WFD2 FTLP16-201ENST00000446400 513 ntBASIC11.47□□□□□ -0.57
NPIPA3F8WFD2 AL583804.1-201ENST00000448643 810 ntTSL 3 BASIC11.47□□□□□ -0.57
NPIPA3F8WFD2 TGFA-207ENST00000450929 950 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
NPIPA3F8WFD2 AL162377.1-202ENST00000456688 1181 ntTSL 2 BASIC11.47□□□□□ -0.57
NPIPA3F8WFD2 AC097381.2-201ENST00000510640 859 ntTSL 2 BASIC11.47□□□□□ -0.57
NPIPA3F8WFD2 AC136475.6-201ENST00000533113 289 ntBASIC11.47□□□□□ -0.57
NPIPA3F8WFD2 SLC25A3-212ENST00000549338 1285 ntAPPRIS ALT1 TSL 3 BASIC11.47□□□□□ -0.57
NPIPA3F8WFD2 AC025257.1-201ENST00000550926 375 ntTSL 3 BASIC11.47□□□□□ -0.57
NPIPA3F8WFD2 DEGS2-202ENST00000553834 421 ntTSL 3 BASIC11.47□□□□□ -0.57
NPIPA3F8WFD2 AC090825.2-201ENST00000557959 739 ntBASIC11.47□□□□□ -0.57
NPIPA3F8WFD2 MIR4688-201ENST00000577966 83 ntBASIC11.47□□□□□ -0.57
NPIPA3F8WFD2 AL109983.1-201ENST00000603234 646 ntBASIC11.47□□□□□ -0.57
NPIPA3F8WFD2 AC104440.1-201ENST00000605010 343 ntBASIC11.47□□□□□ -0.57
NPIPA3F8WFD2 PDZRN3-AS1-202ENST00000608304 774 ntTSL 5 BASIC11.47□□□□□ -0.57
NPIPA3F8WFD2 AC091736.1-201ENST00000609370 305 ntBASIC11.47□□□□□ -0.57
NPIPA3F8WFD2 AC097634.2-201ENST00000615819 604 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
NPIPA3F8WFD2 TNNI2-206ENST00000617947 699 ntAPPRIS ALT1 TSL 5 BASIC11.47□□□□□ -0.57
NPIPA3F8WFD2 AC005609.1-201ENST00000625195 617 ntTSL 5 BASIC11.47□□□□□ -0.57
NPIPA3F8WFD2 Z82244.2-201ENST00000632196 448 ntBASIC11.47□□□□□ -0.57
NPIPA3F8WFD2 AC137936.2-202ENST00000638124 1146 ntTSL 5 BASIC11.47□□□□□ -0.57
NPIPA3F8WFD2 WASF2-202ENST00000618852 5676 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
NPIPA3F8WFD2 DYNC1I1-205ENST00000447467 2947 ntAPPRIS ALT1 TSL 1 (best) BASIC11.47□□□□□ -0.57
NPIPA3F8WFD2 GABPB1-203ENST00000380877 4816 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
NPIPA3F8WFD2 C10orf105-202ENST00000441508 4836 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
NPIPA3F8WFD2 DENND1C-201ENST00000381480 2816 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
NPIPA3F8WFD2 AC096564.1-201ENST00000499098 2810 ntTSL 2 BASIC11.47□□□□□ -0.57
NPIPA3F8WFD2 DNAJB14-205ENST00000442697 6075 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
NPIPA3F8WFD2 IL12A-AS1-203ENST00000497452 2425 ntTSL 2 BASIC11.47□□□□□ -0.57
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms