Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
PCDHB11Q9Y5F2 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC21.29■■□□□ 1
PCDHB11Q9Y5F2 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC21.29■■□□□ 1
PCDHB11Q9Y5F2 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC21.28■■□□□ 1
PCDHB11Q9Y5F2 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC21.28■■□□□ 1
PCDHB11Q9Y5F2 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
PCDHB11Q9Y5F2 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
PCDHB11Q9Y5F2 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC21.28■■□□□ 1
PCDHB11Q9Y5F2 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
PCDHB11Q9Y5F2 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC21.28■■□□□ 1
PCDHB11Q9Y5F2 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC21.28■■□□□ 1
PCDHB11Q9Y5F2 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC21.28■■□□□ 1
PCDHB11Q9Y5F2 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
PCDHB11Q9Y5F2 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC21.28■■□□□ 1
PCDHB11Q9Y5F2 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC21.28■■□□□ 1
PCDHB11Q9Y5F2 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
PCDHB11Q9Y5F2 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
PCDHB11Q9Y5F2 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC21.28■■□□□ 1
PCDHB11Q9Y5F2 GCA-201ENST00000233612 1694 ntTSL 2 BASIC21.28■■□□□ 1
PCDHB11Q9Y5F2 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
PCDHB11Q9Y5F2 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
PCDHB11Q9Y5F2 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC21.27■■□□□ 1
PCDHB11Q9Y5F2 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC21.27■■□□□ 1
PCDHB11Q9Y5F2 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
PCDHB11Q9Y5F2 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
PCDHB11Q9Y5F2 KRT18P5-201ENST00000436075 1291 ntBASIC21.27■■□□□ 1
PCDHB11Q9Y5F2 IGHV3-19-201ENST00000521488 291 ntBASIC21.27■■□□□ 1
PCDHB11Q9Y5F2 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
PCDHB11Q9Y5F2 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC21.27■■□□□ 1
PCDHB11Q9Y5F2 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
PCDHB11Q9Y5F2 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC21.27■■□□□ 1
PCDHB11Q9Y5F2 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC21.27■□□□□ 0.99
PCDHB11Q9Y5F2 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC21.27■□□□□ 0.99
PCDHB11Q9Y5F2 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC21.26■□□□□ 0.99
PCDHB11Q9Y5F2 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC21.26■□□□□ 0.99
PCDHB11Q9Y5F2 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC21.26■□□□□ 0.99
PCDHB11Q9Y5F2 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC21.26■□□□□ 0.99
PCDHB11Q9Y5F2 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
PCDHB11Q9Y5F2 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
PCDHB11Q9Y5F2 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC21.26■□□□□ 0.99
PCDHB11Q9Y5F2 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
PCDHB11Q9Y5F2 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
PCDHB11Q9Y5F2 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC21.26■□□□□ 0.99
PCDHB11Q9Y5F2 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
PCDHB11Q9Y5F2 IKBKGP1-201ENST00000612193 1073 ntBASIC21.26■□□□□ 0.99
PCDHB11Q9Y5F2 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC21.26■□□□□ 0.99
PCDHB11Q9Y5F2 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
PCDHB11Q9Y5F2 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
PCDHB11Q9Y5F2 STX4-202ENST00000394998 1498 ntTSL 2 BASIC21.26■□□□□ 0.99
PCDHB11Q9Y5F2 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
PCDHB11Q9Y5F2 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC21.25■□□□□ 0.99
PCDHB11Q9Y5F2 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC21.25■□□□□ 0.99
PCDHB11Q9Y5F2 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC21.25■□□□□ 0.99
PCDHB11Q9Y5F2 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
PCDHB11Q9Y5F2 AC123595.1-201ENST00000440769 1046 ntBASIC21.25■□□□□ 0.99
PCDHB11Q9Y5F2 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC21.25■□□□□ 0.99
PCDHB11Q9Y5F2 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
PCDHB11Q9Y5F2 RAB43-208ENST00000615093 783 ntTSL 5 BASIC21.25■□□□□ 0.99
PCDHB11Q9Y5F2 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
PCDHB11Q9Y5F2 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
PCDHB11Q9Y5F2 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC21.24■□□□□ 0.99
PCDHB11Q9Y5F2 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
PCDHB11Q9Y5F2 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
PCDHB11Q9Y5F2 HACD1-201ENST00000326961 773 ntTSL 2 BASIC21.24■□□□□ 0.99
PCDHB11Q9Y5F2 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
PCDHB11Q9Y5F2 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
PCDHB11Q9Y5F2 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
PCDHB11Q9Y5F2 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
PCDHB11Q9Y5F2 AC027612.3-201ENST00000413684 1047 ntBASIC21.24■□□□□ 0.99
PCDHB11Q9Y5F2 AL354811.1-201ENST00000610286 706 ntBASIC21.24■□□□□ 0.99
PCDHB11Q9Y5F2 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
PCDHB11Q9Y5F2 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC21.24■□□□□ 0.99
PCDHB11Q9Y5F2 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
PCDHB11Q9Y5F2 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
PCDHB11Q9Y5F2 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
PCDHB11Q9Y5F2 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC21.23■□□□□ 0.99
PCDHB11Q9Y5F2 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC21.23■□□□□ 0.99
PCDHB11Q9Y5F2 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC21.23■□□□□ 0.99
PCDHB11Q9Y5F2 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
PCDHB11Q9Y5F2 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
PCDHB11Q9Y5F2 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC21.23■□□□□ 0.99
PCDHB11Q9Y5F2 GXYLT1P2-201ENST00000433312 1230 ntBASIC21.23■□□□□ 0.99
PCDHB11Q9Y5F2 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
PCDHB11Q9Y5F2 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC21.23■□□□□ 0.99
PCDHB11Q9Y5F2 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC21.23■□□□□ 0.99
PCDHB11Q9Y5F2 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
PCDHB11Q9Y5F2 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC21.23■□□□□ 0.99
PCDHB11Q9Y5F2 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC21.23■□□□□ 0.99
PCDHB11Q9Y5F2 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC21.23■□□□□ 0.99
PCDHB11Q9Y5F2 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
PCDHB11Q9Y5F2 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
PCDHB11Q9Y5F2 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC21.23■□□□□ 0.99
PCDHB11Q9Y5F2 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
PCDHB11Q9Y5F2 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
PCDHB11Q9Y5F2 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
PCDHB11Q9Y5F2 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
PCDHB11Q9Y5F2 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC21.22■□□□□ 0.99
PCDHB11Q9Y5F2 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
PCDHB11Q9Y5F2 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC21.22■□□□□ 0.99
PCDHB11Q9Y5F2 AC010525.1-201ENST00000585559 441 ntBASIC21.22■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms