Protein–RNA interactions for Protein: Q9UQ88

CDK11A, Cyclin-dependent kinase 11A, humanhuman

Predicted RBP Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11AQ9UQ88 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC33.91■■■■□ 3.02
CDK11AQ9UQ88 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC33.9■■■■□ 3.02
CDK11AQ9UQ88 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC33.9■■■■□ 3.02
CDK11AQ9UQ88 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC33.9■■■■□ 3.02
CDK11AQ9UQ88 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC33.9■■■■□ 3.02
CDK11AQ9UQ88 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC33.9■■■■□ 3.02
CDK11AQ9UQ88 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC33.9■■■■□ 3.02
CDK11AQ9UQ88 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC33.9■■■■□ 3.02
CDK11AQ9UQ88 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC33.9■■■■□ 3.02
CDK11AQ9UQ88 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC33.9■■■■□ 3.02
CDK11AQ9UQ88 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC33.9■■■■□ 3.02
CDK11AQ9UQ88 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC33.89■■■■□ 3.02
CDK11AQ9UQ88 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC33.89■■■■□ 3.02
CDK11AQ9UQ88 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC33.89■■■■□ 3.02
CDK11AQ9UQ88 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC33.89■■■■□ 3.02
CDK11AQ9UQ88 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC33.89■■■■□ 3.02
CDK11AQ9UQ88 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC33.89■■■■□ 3.02
CDK11AQ9UQ88 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC33.89■■■■□ 3.02
CDK11AQ9UQ88 AC231657.2-201ENST00000624556 255 ntBASIC33.89■■■■□ 3.02
CDK11AQ9UQ88 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC33.89■■■■□ 3.02
CDK11AQ9UQ88 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC33.88■■■■□ 3.01
CDK11AQ9UQ88 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC33.88■■■■□ 3.01
CDK11AQ9UQ88 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC33.88■■■■□ 3.01
CDK11AQ9UQ88 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC33.88■■■■□ 3.01
CDK11AQ9UQ88 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC33.88■■■■□ 3.01
CDK11AQ9UQ88 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC33.88■■■■□ 3.01
CDK11AQ9UQ88 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC33.88■■■■□ 3.01
CDK11AQ9UQ88 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC33.88■■■■□ 3.01
CDK11AQ9UQ88 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC33.88■■■■□ 3.01
CDK11AQ9UQ88 AC142086.2-201ENST00000569753 217 ntBASIC33.88■■■■□ 3.01
CDK11AQ9UQ88 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC33.88■■■■□ 3.01
CDK11AQ9UQ88 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC33.88■■■■□ 3.01
CDK11AQ9UQ88 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC33.88■■■■□ 3.01
CDK11AQ9UQ88 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC33.88■■■■□ 3.01
CDK11AQ9UQ88 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC33.88■■■■□ 3.01
CDK11AQ9UQ88 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC33.88■■■■□ 3.01
CDK11AQ9UQ88 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC33.87■■■■□ 3.01
CDK11AQ9UQ88 ABCB10P4-201ENST00000566803 2184 ntBASIC33.87■■■■□ 3.01
CDK11AQ9UQ88 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC33.87■■■■□ 3.01
CDK11AQ9UQ88 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC33.87■■■■□ 3.01
CDK11AQ9UQ88 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC33.87■■■■□ 3.01
CDK11AQ9UQ88 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC33.87■■■■□ 3.01
CDK11AQ9UQ88 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC33.87■■■■□ 3.01
CDK11AQ9UQ88 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC33.87■■■■□ 3.01
CDK11AQ9UQ88 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC33.86■■■■□ 3.01
CDK11AQ9UQ88 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC33.86■■■■□ 3.01
CDK11AQ9UQ88 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC33.86■■■■□ 3.01
CDK11AQ9UQ88 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC33.86■■■■□ 3.01
CDK11AQ9UQ88 AL121832.2-201ENST00000610979 668 ntBASIC33.86■■■■□ 3.01
CDK11AQ9UQ88 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC33.86■■■■□ 3.01
CDK11AQ9UQ88 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC33.85■■■■□ 3.01
CDK11AQ9UQ88 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC33.85■■■■□ 3.01
CDK11AQ9UQ88 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC33.85■■■■□ 3.01
CDK11AQ9UQ88 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC33.85■■■■□ 3.01
CDK11AQ9UQ88 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC33.85■■■■□ 3.01
CDK11AQ9UQ88 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC33.85■■■■□ 3.01
CDK11AQ9UQ88 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC33.85■■■■□ 3.01
CDK11AQ9UQ88 DUX4L16-201ENST00000555130 1264 ntBASIC33.85■■■■□ 3.01
CDK11AQ9UQ88 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC33.85■■■■□ 3.01
CDK11AQ9UQ88 AL050303.2-201ENST00000619798 666 ntBASIC33.85■■■■□ 3.01
CDK11AQ9UQ88 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC33.84■■■■□ 3.01
CDK11AQ9UQ88 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC33.84■■■■□ 3.01
CDK11AQ9UQ88 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC33.84■■■■□ 3.01
CDK11AQ9UQ88 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC33.84■■■■□ 3.01
CDK11AQ9UQ88 TFG-210ENST00000620299 1289 ntTSL 5 BASIC33.84■■■■□ 3.01
CDK11AQ9UQ88 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC33.84■■■■□ 3.01
CDK11AQ9UQ88 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC33.83■■■■□ 3.01
CDK11AQ9UQ88 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC33.83■■■■□ 3.01
CDK11AQ9UQ88 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC33.83■■■■□ 3.01
CDK11AQ9UQ88 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC33.83■■■■□ 3.01
CDK11AQ9UQ88 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC33.83■■■■□ 3.01
CDK11AQ9UQ88 MAZ-216ENST00000616501 991 ntTSL 5 BASIC33.83■■■■□ 3.01
CDK11AQ9UQ88 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC33.83■■■■□ 3.01
CDK11AQ9UQ88 GAMT-205ENST00000640762 751 ntTSL 5 BASIC33.83■■■■□ 3.01
CDK11AQ9UQ88 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC33.83■■■■□ 3.01
CDK11AQ9UQ88 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC33.83■■■■□ 3.01
CDK11AQ9UQ88 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC33.82■■■■□ 3.01
CDK11AQ9UQ88 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC33.82■■■■□ 3.01
CDK11AQ9UQ88 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC33.82■■■■□ 3.01
CDK11AQ9UQ88 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC33.82■■■■□ 3
CDK11AQ9UQ88 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC33.82■■■■□ 3
CDK11AQ9UQ88 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC33.82■■■■□ 3
CDK11AQ9UQ88 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC33.82■■■■□ 3
CDK11AQ9UQ88 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC33.81■■■■□ 3
CDK11AQ9UQ88 MFF-207ENST00000409565 1548 ntTSL 2 BASIC33.81■■■■□ 3
CDK11AQ9UQ88 PARP1-202ENST00000366792 553 ntTSL 3 BASIC33.81■■■■□ 3
CDK11AQ9UQ88 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC33.81■■■■□ 3
CDK11AQ9UQ88 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC33.81■■■■□ 3
CDK11AQ9UQ88 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC33.81■■■■□ 3
CDK11AQ9UQ88 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC33.81■■■■□ 3
CDK11AQ9UQ88 UBE2DNL-204ENST00000602536 740 ntBASIC33.81■■■■□ 3
CDK11AQ9UQ88 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC33.81■■■■□ 3
CDK11AQ9UQ88 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC33.81■■■■□ 3
CDK11AQ9UQ88 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC33.8■■■■□ 3
CDK11AQ9UQ88 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC33.8■■■■□ 3
CDK11AQ9UQ88 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC33.8■■■■□ 3
CDK11AQ9UQ88 AC007322.1-201ENST00000426983 750 ntBASIC33.8■■■■□ 3
CDK11AQ9UQ88 TSPY6P-201ENST00000448518 926 ntBASIC33.8■■■■□ 3
CDK11AQ9UQ88 AC083906.2-201ENST00000511578 360 ntBASIC33.8■■■■□ 3
CDK11AQ9UQ88 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC33.8■■■■□ 3
Retrieved 100 of 98,524 protein–RNA pairs in 16.7 ms