Protein–RNA interactions for Protein: Q9NP66

HMG20A, High mobility group protein 20A, humanhuman

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20AQ9NP66 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
HMG20AQ9NP66 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
HMG20AQ9NP66 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
HMG20AQ9NP66 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
HMG20AQ9NP66 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC19.66■□□□□ 0.74
HMG20AQ9NP66 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC19.66■□□□□ 0.74
HMG20AQ9NP66 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
HMG20AQ9NP66 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
HMG20AQ9NP66 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
HMG20AQ9NP66 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
HMG20AQ9NP66 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC19.66■□□□□ 0.74
HMG20AQ9NP66 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
HMG20AQ9NP66 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
HMG20AQ9NP66 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC19.66■□□□□ 0.74
HMG20AQ9NP66 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
HMG20AQ9NP66 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
HMG20AQ9NP66 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
HMG20AQ9NP66 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC19.65■□□□□ 0.74
HMG20AQ9NP66 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC19.65■□□□□ 0.74
HMG20AQ9NP66 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
HMG20AQ9NP66 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
HMG20AQ9NP66 LONRF2P2-201ENST00000439212 571 ntBASIC19.65■□□□□ 0.74
HMG20AQ9NP66 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC19.65■□□□□ 0.74
HMG20AQ9NP66 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC19.65■□□□□ 0.74
HMG20AQ9NP66 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC19.65■□□□□ 0.74
HMG20AQ9NP66 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
HMG20AQ9NP66 AF106564.1-201ENST00000607058 2553 ntBASIC19.65■□□□□ 0.74
HMG20AQ9NP66 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
HMG20AQ9NP66 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
HMG20AQ9NP66 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
HMG20AQ9NP66 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
HMG20AQ9NP66 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC19.64■□□□□ 0.74
HMG20AQ9NP66 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.74
HMG20AQ9NP66 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
HMG20AQ9NP66 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
HMG20AQ9NP66 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
HMG20AQ9NP66 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC19.64■□□□□ 0.73
HMG20AQ9NP66 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC19.64■□□□□ 0.73
HMG20AQ9NP66 SSSCA1-AS1-201ENST00000567594 614 ntBASIC19.64■□□□□ 0.73
HMG20AQ9NP66 NTF6A-201ENST00000591175 560 ntBASIC19.64■□□□□ 0.73
HMG20AQ9NP66 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
HMG20AQ9NP66 AC090877.2-201ENST00000558441 1738 ntBASIC19.64■□□□□ 0.73
HMG20AQ9NP66 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC19.64■□□□□ 0.73
HMG20AQ9NP66 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
HMG20AQ9NP66 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
HMG20AQ9NP66 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC19.64■□□□□ 0.73
HMG20AQ9NP66 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
HMG20AQ9NP66 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
HMG20AQ9NP66 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
HMG20AQ9NP66 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
HMG20AQ9NP66 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
HMG20AQ9NP66 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
HMG20AQ9NP66 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
HMG20AQ9NP66 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
HMG20AQ9NP66 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
HMG20AQ9NP66 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
HMG20AQ9NP66 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC19.63■□□□□ 0.73
HMG20AQ9NP66 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC19.63■□□□□ 0.73
HMG20AQ9NP66 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
HMG20AQ9NP66 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
HMG20AQ9NP66 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC19.62■□□□□ 0.73
HMG20AQ9NP66 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
HMG20AQ9NP66 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC19.62■□□□□ 0.73
HMG20AQ9NP66 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
HMG20AQ9NP66 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
HMG20AQ9NP66 HYI-210ENST00000486909 905 ntTSL 5 BASIC19.62■□□□□ 0.73
HMG20AQ9NP66 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC19.62■□□□□ 0.73
HMG20AQ9NP66 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
HMG20AQ9NP66 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
HMG20AQ9NP66 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
HMG20AQ9NP66 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
HMG20AQ9NP66 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
HMG20AQ9NP66 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
HMG20AQ9NP66 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
HMG20AQ9NP66 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC19.61■□□□□ 0.73
HMG20AQ9NP66 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
HMG20AQ9NP66 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC19.61■□□□□ 0.73
HMG20AQ9NP66 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC19.61■□□□□ 0.73
HMG20AQ9NP66 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
HMG20AQ9NP66 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC19.61■□□□□ 0.73
HMG20AQ9NP66 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
HMG20AQ9NP66 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
HMG20AQ9NP66 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC19.6■□□□□ 0.73
HMG20AQ9NP66 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
HMG20AQ9NP66 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC19.6■□□□□ 0.73
HMG20AQ9NP66 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
HMG20AQ9NP66 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC19.6■□□□□ 0.73
HMG20AQ9NP66 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC19.6■□□□□ 0.73
HMG20AQ9NP66 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
HMG20AQ9NP66 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC19.6■□□□□ 0.73
HMG20AQ9NP66 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
HMG20AQ9NP66 CD37-213ENST00000598095 1598 ntTSL 2 BASIC19.6■□□□□ 0.73
HMG20AQ9NP66 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC19.6■□□□□ 0.73
HMG20AQ9NP66 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
HMG20AQ9NP66 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
HMG20AQ9NP66 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
HMG20AQ9NP66 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
HMG20AQ9NP66 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
HMG20AQ9NP66 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC19.59■□□□□ 0.73
HMG20AQ9NP66 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 18.6 ms