Protein–RNA interactions for Protein: Q9H7N4

SCAF1, Splicing factor, arginine/serine-rich 19, humanhuman

Known RBP Predictions only

Length 1,312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1Q9H7N4 PARP1-210ENST00000629232 477 ntTSL 5 BASIC32.18■■■□□ 2.74
SCAF1Q9H7N4 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC32.17■■■□□ 2.74
SCAF1Q9H7N4 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC32.17■■■□□ 2.74
SCAF1Q9H7N4 SNX3-202ENST00000349379 890 ntTSL 2 BASIC32.17■■■□□ 2.74
SCAF1Q9H7N4 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC32.17■■■□□ 2.74
SCAF1Q9H7N4 APTR-205ENST00000447009 902 ntTSL 2 BASIC32.17■■■□□ 2.74
SCAF1Q9H7N4 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC32.17■■■□□ 2.74
SCAF1Q9H7N4 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC32.17■■■□□ 2.74
SCAF1Q9H7N4 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC32.17■■■□□ 2.74
SCAF1Q9H7N4 REST-206ENST00000612429 1376 ntTSL 5 BASIC32.17■■■□□ 2.74
SCAF1Q9H7N4 REST-207ENST00000616975 1370 ntTSL 5 BASIC32.17■■■□□ 2.74
SCAF1Q9H7N4 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC32.16■■■□□ 2.74
SCAF1Q9H7N4 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC32.16■■■□□ 2.74
SCAF1Q9H7N4 TERT-206ENST00000508104 2486 ntTSL 5 BASIC32.16■■■□□ 2.74
SCAF1Q9H7N4 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC32.16■■■□□ 2.74
SCAF1Q9H7N4 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC32.16■■■□□ 2.74
SCAF1Q9H7N4 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC32.16■■■□□ 2.74
SCAF1Q9H7N4 MIR3181-201ENST00000578512 73 ntBASIC32.16■■■□□ 2.74
SCAF1Q9H7N4 TERF1P2-201ENST00000583350 1212 ntBASIC32.16■■■□□ 2.74
SCAF1Q9H7N4 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC32.16■■■□□ 2.74
SCAF1Q9H7N4 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC32.16■■■□□ 2.74
SCAF1Q9H7N4 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC32.16■■■□□ 2.74
SCAF1Q9H7N4 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC32.16■■■□□ 2.74
SCAF1Q9H7N4 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC32.16■■■□□ 2.74
SCAF1Q9H7N4 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC32.16■■■□□ 2.74
SCAF1Q9H7N4 LINC00526-201ENST00000581067 1875 ntBASIC32.15■■■□□ 2.74
SCAF1Q9H7N4 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC32.15■■■□□ 2.74
SCAF1Q9H7N4 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC32.15■■■□□ 2.74
SCAF1Q9H7N4 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC32.15■■■□□ 2.74
SCAF1Q9H7N4 AC006015.1-201ENST00000429970 570 ntBASIC32.15■■■□□ 2.74
SCAF1Q9H7N4 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC32.15■■■□□ 2.74
SCAF1Q9H7N4 AC137761.2-201ENST00000561729 223 ntBASIC32.15■■■□□ 2.74
SCAF1Q9H7N4 AC145350.3-201ENST00000569033 163 ntBASIC32.15■■■□□ 2.74
SCAF1Q9H7N4 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC32.15■■■□□ 2.74
SCAF1Q9H7N4 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC32.15■■■□□ 2.74
SCAF1Q9H7N4 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC32.15■■■□□ 2.74
SCAF1Q9H7N4 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC32.15■■■□□ 2.74
SCAF1Q9H7N4 AC009102.2-201ENST00000606772 1639 ntBASIC32.14■■■□□ 2.74
SCAF1Q9H7N4 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC32.14■■■□□ 2.74
SCAF1Q9H7N4 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC32.14■■■□□ 2.74
SCAF1Q9H7N4 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC32.14■■■□□ 2.74
SCAF1Q9H7N4 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC32.14■■■□□ 2.74
SCAF1Q9H7N4 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC32.14■■■□□ 2.74
SCAF1Q9H7N4 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC32.13■■■□□ 2.73
SCAF1Q9H7N4 AP003733.4-201ENST00000623785 1697 ntBASIC32.13■■■□□ 2.73
SCAF1Q9H7N4 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC32.13■■■□□ 2.73
SCAF1Q9H7N4 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC32.13■■■□□ 2.73
SCAF1Q9H7N4 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC32.13■■■□□ 2.73
SCAF1Q9H7N4 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC32.13■■■□□ 2.73
SCAF1Q9H7N4 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC32.13■■■□□ 2.73
SCAF1Q9H7N4 AL354811.1-201ENST00000610286 706 ntBASIC32.13■■■□□ 2.73
SCAF1Q9H7N4 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC32.13■■■□□ 2.73
SCAF1Q9H7N4 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC32.13■■■□□ 2.73
SCAF1Q9H7N4 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC32.12■■■□□ 2.73
SCAF1Q9H7N4 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC32.12■■■□□ 2.73
SCAF1Q9H7N4 LINC02228-203ENST00000641970 1355 ntBASIC32.12■■■□□ 2.73
SCAF1Q9H7N4 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC32.12■■■□□ 2.73
SCAF1Q9H7N4 AICDA-202ENST00000537228 667 ntTSL 5 BASIC32.12■■■□□ 2.73
SCAF1Q9H7N4 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC32.12■■■□□ 2.73
SCAF1Q9H7N4 AC241377.3-202ENST00000626088 1088 ntBASIC32.12■■■□□ 2.73
SCAF1Q9H7N4 AC241585.3-202ENST00000628937 1088 ntBASIC32.12■■■□□ 2.73
SCAF1Q9H7N4 DUSP8P3-201ENST00000399571 1760 ntBASIC32.12■■■□□ 2.73
SCAF1Q9H7N4 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC32.12■■■□□ 2.73
SCAF1Q9H7N4 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC32.12■■■□□ 2.73
SCAF1Q9H7N4 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC32.12■■■□□ 2.73
SCAF1Q9H7N4 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC32.11■■■□□ 2.73
SCAF1Q9H7N4 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC32.11■■■□□ 2.73
SCAF1Q9H7N4 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC32.11■■■□□ 2.73
SCAF1Q9H7N4 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC32.11■■■□□ 2.73
SCAF1Q9H7N4 NT5C3AP1-201ENST00000394500 1012 ntBASIC32.11■■■□□ 2.73
SCAF1Q9H7N4 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC32.11■■■□□ 2.73
SCAF1Q9H7N4 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC32.11■■■□□ 2.73
SCAF1Q9H7N4 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC32.11■■■□□ 2.73
SCAF1Q9H7N4 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC32.11■■■□□ 2.73
SCAF1Q9H7N4 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC32.1■■■□□ 2.73
SCAF1Q9H7N4 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC32.1■■■□□ 2.73
SCAF1Q9H7N4 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC32.1■■■□□ 2.73
SCAF1Q9H7N4 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC32.1■■■□□ 2.73
SCAF1Q9H7N4 CROCCP5-201ENST00000436658 830 ntBASIC32.1■■■□□ 2.73
SCAF1Q9H7N4 WT1-AS_3.1-201ENST00000613262 234 ntBASIC32.1■■■□□ 2.73
SCAF1Q9H7N4 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC32.1■■■□□ 2.73
SCAF1Q9H7N4 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC32.09■■■□□ 2.73
SCAF1Q9H7N4 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC32.09■■■□□ 2.73
SCAF1Q9H7N4 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC32.09■■■□□ 2.73
SCAF1Q9H7N4 AC092667.1-201ENST00000434301 2586 ntBASIC32.09■■■□□ 2.73
SCAF1Q9H7N4 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC32.09■■■□□ 2.73
SCAF1Q9H7N4 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC32.09■■■□□ 2.73
SCAF1Q9H7N4 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC32.08■■■□□ 2.73
SCAF1Q9H7N4 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC32.08■■■□□ 2.73
SCAF1Q9H7N4 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC32.08■■■□□ 2.73
SCAF1Q9H7N4 MIR572-201ENST00000384983 95 ntBASIC32.08■■■□□ 2.73
SCAF1Q9H7N4 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC32.08■■■□□ 2.73
SCAF1Q9H7N4 AC009086.3-201ENST00000623486 1008 ntBASIC32.08■■■□□ 2.73
SCAF1Q9H7N4 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC32.08■■■□□ 2.73
SCAF1Q9H7N4 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC32.08■■■□□ 2.73
SCAF1Q9H7N4 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC32.08■■■□□ 2.73
SCAF1Q9H7N4 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC32.07■■■□□ 2.73
SCAF1Q9H7N4 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC32.07■■■□□ 2.72
SCAF1Q9H7N4 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC32.07■■■□□ 2.72
SCAF1Q9H7N4 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC32.07■■■□□ 2.72
Retrieved 100 of 98,524 protein–RNA pairs in 17.1 ms