Protein–RNA interactions for Protein: Q9H078

CLPB, Caseinolytic peptidase B protein homolog, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPBQ9H078 AK1-201ENST00000223836 736 ntTSL 3 BASIC21.82■■□□□ 1.08
CLPBQ9H078 AICDA-202ENST00000537228 667 ntTSL 5 BASIC21.82■■□□□ 1.08
CLPBQ9H078 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
CLPBQ9H078 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
CLPBQ9H078 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC21.82■■□□□ 1.08
CLPBQ9H078 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC21.82■■□□□ 1.08
CLPBQ9H078 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CLPBQ9H078 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CLPBQ9H078 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
CLPBQ9H078 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC21.82■■□□□ 1.08
CLPBQ9H078 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC21.82■■□□□ 1.08
CLPBQ9H078 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CLPBQ9H078 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC21.81■■□□□ 1.08
CLPBQ9H078 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
CLPBQ9H078 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CLPBQ9H078 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
CLPBQ9H078 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CLPBQ9H078 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC21.81■■□□□ 1.08
CLPBQ9H078 IGHV3-19-201ENST00000521488 291 ntBASIC21.81■■□□□ 1.08
CLPBQ9H078 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC21.81■■□□□ 1.08
CLPBQ9H078 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
CLPBQ9H078 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CLPBQ9H078 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC21.8■■□□□ 1.08
CLPBQ9H078 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
CLPBQ9H078 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
CLPBQ9H078 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
CLPBQ9H078 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CLPBQ9H078 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CLPBQ9H078 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CLPBQ9H078 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CLPBQ9H078 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CLPBQ9H078 PARL-206ENST00000435888 1098 ntTSL 5 BASIC21.8■■□□□ 1.08
CLPBQ9H078 OR2I1P-207ENST00000453522 948 ntBASIC21.8■■□□□ 1.08
CLPBQ9H078 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CLPBQ9H078 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CLPBQ9H078 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC21.79■■□□□ 1.08
CLPBQ9H078 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC21.79■■□□□ 1.08
CLPBQ9H078 LINC01960-201ENST00000563759 1884 ntBASIC21.79■■□□□ 1.08
CLPBQ9H078 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC21.79■■□□□ 1.08
CLPBQ9H078 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
CLPBQ9H078 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
CLPBQ9H078 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
CLPBQ9H078 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CLPBQ9H078 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
CLPBQ9H078 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CLPBQ9H078 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
CLPBQ9H078 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
CLPBQ9H078 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
CLPBQ9H078 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
CLPBQ9H078 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CLPBQ9H078 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CLPBQ9H078 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
CLPBQ9H078 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
CLPBQ9H078 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC21.78■■□□□ 1.08
CLPBQ9H078 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC21.78■■□□□ 1.08
CLPBQ9H078 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC21.78■■□□□ 1.08
CLPBQ9H078 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC21.78■■□□□ 1.08
CLPBQ9H078 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC21.78■■□□□ 1.08
CLPBQ9H078 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
CLPBQ9H078 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
CLPBQ9H078 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
CLPBQ9H078 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CLPBQ9H078 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CLPBQ9H078 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CLPBQ9H078 MIR572-201ENST00000384983 95 ntBASIC21.77■■□□□ 1.08
CLPBQ9H078 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
CLPBQ9H078 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC21.77■■□□□ 1.08
CLPBQ9H078 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CLPBQ9H078 AL031602.1-201ENST00000633169 911 ntBASIC21.77■■□□□ 1.08
CLPBQ9H078 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.07
CLPBQ9H078 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
CLPBQ9H078 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC21.76■■□□□ 1.07
CLPBQ9H078 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CLPBQ9H078 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CLPBQ9H078 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CLPBQ9H078 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CLPBQ9H078 NME4-202ENST00000382940 766 ntTSL 3 BASIC21.76■■□□□ 1.07
CLPBQ9H078 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
CLPBQ9H078 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC21.76■■□□□ 1.07
CLPBQ9H078 NME4-211ENST00000620944 1193 ntTSL 2 BASIC21.76■■□□□ 1.07
CLPBQ9H078 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC21.76■■□□□ 1.07
CLPBQ9H078 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC21.76■■□□□ 1.07
CLPBQ9H078 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CLPBQ9H078 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC21.75■■□□□ 1.07
CLPBQ9H078 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CLPBQ9H078 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CLPBQ9H078 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
CLPBQ9H078 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CLPBQ9H078 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CLPBQ9H078 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
CLPBQ9H078 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CLPBQ9H078 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC21.75■■□□□ 1.07
CLPBQ9H078 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC21.75■■□□□ 1.07
CLPBQ9H078 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC21.75■■□□□ 1.07
CLPBQ9H078 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC21.75■■□□□ 1.07
CLPBQ9H078 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CLPBQ9H078 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC21.75■■□□□ 1.07
CLPBQ9H078 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC21.75■■□□□ 1.07
CLPBQ9H078 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC21.74■■□□□ 1.07
CLPBQ9H078 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms