Protein–RNA interactions for Protein: Q99466

NOTCH4, Neurogenic locus notch homolog protein 4, humanhuman

Predictions only

Length 2,003 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH4Q99466 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC22.69■■□□□ 1.22
NOTCH4Q99466 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
NOTCH4Q99466 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC22.69■■□□□ 1.22
NOTCH4Q99466 PXK-203ENST00000383715 1756 ntTSL 5 BASIC22.69■■□□□ 1.22
NOTCH4Q99466 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC22.69■■□□□ 1.22
NOTCH4Q99466 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC22.69■■□□□ 1.22
NOTCH4Q99466 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
NOTCH4Q99466 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
NOTCH4Q99466 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC22.69■■□□□ 1.22
NOTCH4Q99466 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC22.69■■□□□ 1.22
NOTCH4Q99466 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC22.69■■□□□ 1.22
NOTCH4Q99466 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC22.68■■□□□ 1.22
NOTCH4Q99466 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC22.68■■□□□ 1.22
NOTCH4Q99466 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC22.68■■□□□ 1.22
NOTCH4Q99466 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
NOTCH4Q99466 AC092068.2-201ENST00000590491 1708 ntBASIC22.68■■□□□ 1.22
NOTCH4Q99466 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC22.67■■□□□ 1.22
NOTCH4Q99466 ABHD17AP1-201ENST00000358206 933 ntBASIC22.67■■□□□ 1.22
NOTCH4Q99466 AC079140.4-201ENST00000507448 529 ntBASIC22.67■■□□□ 1.22
NOTCH4Q99466 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC22.67■■□□□ 1.22
NOTCH4Q99466 UBE2DNL-204ENST00000602536 740 ntBASIC22.67■■□□□ 1.22
NOTCH4Q99466 MAZ-216ENST00000616501 991 ntTSL 5 BASIC22.67■■□□□ 1.22
NOTCH4Q99466 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC22.67■■□□□ 1.22
NOTCH4Q99466 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC22.67■■□□□ 1.22
NOTCH4Q99466 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC22.67■■□□□ 1.22
NOTCH4Q99466 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC22.67■■□□□ 1.22
NOTCH4Q99466 OXCT2P1-201ENST00000447263 1535 ntBASIC22.67■■□□□ 1.22
NOTCH4Q99466 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
NOTCH4Q99466 AL355802.2-201ENST00000402069 882 ntBASIC22.67■■□□□ 1.22
NOTCH4Q99466 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC22.67■■□□□ 1.22
NOTCH4Q99466 AL109923.1-201ENST00000618799 583 ntBASIC22.67■■□□□ 1.22
NOTCH4Q99466 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC22.66■■□□□ 1.22
NOTCH4Q99466 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC22.66■■□□□ 1.22
NOTCH4Q99466 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC22.66■■□□□ 1.22
NOTCH4Q99466 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
NOTCH4Q99466 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC22.66■■□□□ 1.22
NOTCH4Q99466 AC011767.1-201ENST00000617410 1153 ntBASIC22.66■■□□□ 1.22
NOTCH4Q99466 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC22.66■■□□□ 1.22
NOTCH4Q99466 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC22.66■■□□□ 1.22
NOTCH4Q99466 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC22.65■■□□□ 1.22
NOTCH4Q99466 CNN2P6-201ENST00000439038 900 ntBASIC22.65■■□□□ 1.22
NOTCH4Q99466 AC006970.2-201ENST00000450065 779 ntBASIC22.65■■□□□ 1.22
NOTCH4Q99466 SLC7A5P2-201ENST00000553010 536 ntBASIC22.65■■□□□ 1.22
NOTCH4Q99466 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC22.65■■□□□ 1.22
NOTCH4Q99466 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
NOTCH4Q99466 GUSBP6-202ENST00000438529 1198 ntBASIC22.65■■□□□ 1.22
NOTCH4Q99466 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC22.65■■□□□ 1.22
NOTCH4Q99466 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC22.65■■□□□ 1.22
NOTCH4Q99466 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC22.65■■□□□ 1.22
NOTCH4Q99466 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
NOTCH4Q99466 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC22.65■■□□□ 1.22
NOTCH4Q99466 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC22.64■■□□□ 1.22
NOTCH4Q99466 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC22.64■■□□□ 1.22
NOTCH4Q99466 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC22.64■■□□□ 1.22
NOTCH4Q99466 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
NOTCH4Q99466 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC22.64■■□□□ 1.22
NOTCH4Q99466 AC009237.3-201ENST00000393279 1427 ntBASIC22.64■■□□□ 1.22
NOTCH4Q99466 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC22.64■■□□□ 1.21
NOTCH4Q99466 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
NOTCH4Q99466 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC22.64■■□□□ 1.21
NOTCH4Q99466 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
NOTCH4Q99466 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC22.64■■□□□ 1.21
NOTCH4Q99466 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC22.63■■□□□ 1.21
NOTCH4Q99466 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
NOTCH4Q99466 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
NOTCH4Q99466 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC22.63■■□□□ 1.21
NOTCH4Q99466 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC22.63■■□□□ 1.21
NOTCH4Q99466 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
NOTCH4Q99466 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC22.63■■□□□ 1.21
NOTCH4Q99466 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
NOTCH4Q99466 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
NOTCH4Q99466 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
NOTCH4Q99466 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
NOTCH4Q99466 LINC01960-201ENST00000563759 1884 ntBASIC22.63■■□□□ 1.21
NOTCH4Q99466 MFF-207ENST00000409565 1548 ntTSL 2 BASIC22.63■■□□□ 1.21
NOTCH4Q99466 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC22.62■■□□□ 1.21
NOTCH4Q99466 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
NOTCH4Q99466 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
NOTCH4Q99466 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC22.62■■□□□ 1.21
NOTCH4Q99466 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
NOTCH4Q99466 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
NOTCH4Q99466 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
NOTCH4Q99466 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC22.62■■□□□ 1.21
NOTCH4Q99466 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
NOTCH4Q99466 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC22.62■■□□□ 1.21
NOTCH4Q99466 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
NOTCH4Q99466 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC22.62■■□□□ 1.21
NOTCH4Q99466 DUSP8P5-201ENST00000422884 1815 ntBASIC22.61■■□□□ 1.21
NOTCH4Q99466 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC22.61■■□□□ 1.21
NOTCH4Q99466 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC22.61■■□□□ 1.21
NOTCH4Q99466 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
NOTCH4Q99466 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC22.61■■□□□ 1.21
NOTCH4Q99466 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC22.61■■□□□ 1.21
NOTCH4Q99466 AC142086.2-201ENST00000569753 217 ntBASIC22.61■■□□□ 1.21
NOTCH4Q99466 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
NOTCH4Q99466 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
NOTCH4Q99466 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC22.61■■□□□ 1.21
NOTCH4Q99466 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC22.61■■□□□ 1.21
NOTCH4Q99466 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC22.61■■□□□ 1.21
NOTCH4Q99466 ANOS2P-203ENST00000472227 1816 ntBASIC22.61■■□□□ 1.21
Retrieved 100 of 98,524 protein–RNA pairs in 15.8 ms