Protein–RNA interactions for Protein: Q96RW7

HMCN1, Hemicentin-1, humanhuman

Predictions only

Length 5,635 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMCN1Q96RW7 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
HMCN1Q96RW7 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC6.81□□□□□ -1.32
HMCN1Q96RW7 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC6.81□□□□□ -1.32
HMCN1Q96RW7 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC6.8□□□□□ -1.32
HMCN1Q96RW7 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
HMCN1Q96RW7 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC6.8□□□□□ -1.32
HMCN1Q96RW7 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC6.8□□□□□ -1.32
HMCN1Q96RW7 USF2-205ENST00000594064 1179 ntTSL 2 BASIC6.8□□□□□ -1.32
HMCN1Q96RW7 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC6.8□□□□□ -1.32
HMCN1Q96RW7 AC145285.6-201ENST00000604632 637 ntBASIC6.8□□□□□ -1.32
HMCN1Q96RW7 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
HMCN1Q96RW7 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC6.8□□□□□ -1.32
HMCN1Q96RW7 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC6.8□□□□□ -1.32
HMCN1Q96RW7 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC6.8□□□□□ -1.32
HMCN1Q96RW7 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC6.8□□□□□ -1.32
HMCN1Q96RW7 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC6.8□□□□□ -1.32
HMCN1Q96RW7 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC6.8□□□□□ -1.32
HMCN1Q96RW7 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
HMCN1Q96RW7 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
HMCN1Q96RW7 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC6.8□□□□□ -1.32
HMCN1Q96RW7 AC113347.1-201ENST00000413321 391 ntBASIC6.8□□□□□ -1.32
HMCN1Q96RW7 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC6.8□□□□□ -1.32
HMCN1Q96RW7 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC6.8□□□□□ -1.32
HMCN1Q96RW7 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC6.8□□□□□ -1.32
HMCN1Q96RW7 AC107956.1-201ENST00000494359 873 ntBASIC6.8□□□□□ -1.32
HMCN1Q96RW7 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC6.8□□□□□ -1.32
HMCN1Q96RW7 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
HMCN1Q96RW7 SNX21-213ENST00000614929 587 ntTSL 5 BASIC6.8□□□□□ -1.32
HMCN1Q96RW7 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
HMCN1Q96RW7 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
HMCN1Q96RW7 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
HMCN1Q96RW7 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC6.8□□□□□ -1.32
HMCN1Q96RW7 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
HMCN1Q96RW7 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC6.8□□□□□ -1.32
HMCN1Q96RW7 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC6.8□□□□□ -1.32
HMCN1Q96RW7 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC6.8□□□□□ -1.32
HMCN1Q96RW7 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
HMCN1Q96RW7 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
HMCN1Q96RW7 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC6.8□□□□□ -1.32
HMCN1Q96RW7 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
HMCN1Q96RW7 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC6.79□□□□□ -1.32
HMCN1Q96RW7 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
HMCN1Q96RW7 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC6.79□□□□□ -1.32
HMCN1Q96RW7 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC6.79□□□□□ -1.32
HMCN1Q96RW7 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC6.79□□□□□ -1.32
HMCN1Q96RW7 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC6.79□□□□□ -1.32
HMCN1Q96RW7 NTF6B-201ENST00000591913 560 ntBASIC6.79□□□□□ -1.32
HMCN1Q96RW7 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC6.79□□□□□ -1.32
HMCN1Q96RW7 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC6.79□□□□□ -1.32
HMCN1Q96RW7 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC6.79□□□□□ -1.32
HMCN1Q96RW7 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC6.79□□□□□ -1.32
HMCN1Q96RW7 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC6.79□□□□□ -1.32
HMCN1Q96RW7 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC6.79□□□□□ -1.32
HMCN1Q96RW7 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC6.79□□□□□ -1.32
HMCN1Q96RW7 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
HMCN1Q96RW7 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
HMCN1Q96RW7 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC6.79□□□□□ -1.32
HMCN1Q96RW7 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC6.79□□□□□ -1.32
HMCN1Q96RW7 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
HMCN1Q96RW7 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC6.79□□□□□ -1.32
HMCN1Q96RW7 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC6.79□□□□□ -1.32
HMCN1Q96RW7 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC6.79□□□□□ -1.32
HMCN1Q96RW7 AC097658.1-201ENST00000475555 843 ntBASIC6.79□□□□□ -1.32
HMCN1Q96RW7 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC6.79□□□□□ -1.32
HMCN1Q96RW7 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC6.79□□□□□ -1.32
HMCN1Q96RW7 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
HMCN1Q96RW7 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
HMCN1Q96RW7 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC6.79□□□□□ -1.32
HMCN1Q96RW7 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC6.79□□□□□ -1.32
HMCN1Q96RW7 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC6.79□□□□□ -1.32
HMCN1Q96RW7 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC6.79□□□□□ -1.32
HMCN1Q96RW7 RBM42-202ENST00000586618 771 ntTSL 3 BASIC6.79□□□□□ -1.32
HMCN1Q96RW7 FAM197Y4-202ENST00000622692 608 ntBASIC6.79□□□□□ -1.32
HMCN1Q96RW7 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC6.79□□□□□ -1.32
HMCN1Q96RW7 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC6.79□□□□□ -1.32
HMCN1Q96RW7 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
HMCN1Q96RW7 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
HMCN1Q96RW7 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC6.78□□□□□ -1.32
HMCN1Q96RW7 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
HMCN1Q96RW7 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC6.78□□□□□ -1.32
HMCN1Q96RW7 VPS72-207ENST00000640458 689 ntTSL 5 BASIC6.78□□□□□ -1.32
HMCN1Q96RW7 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC6.78□□□□□ -1.32
HMCN1Q96RW7 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
HMCN1Q96RW7 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
HMCN1Q96RW7 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
HMCN1Q96RW7 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
HMCN1Q96RW7 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
HMCN1Q96RW7 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
HMCN1Q96RW7 AC009947.2-201ENST00000444014 672 ntBASIC6.78□□□□□ -1.32
HMCN1Q96RW7 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC6.78□□□□□ -1.32
HMCN1Q96RW7 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC6.78□□□□□ -1.32
HMCN1Q96RW7 AP001160.3-201ENST00000601484 763 ntBASIC6.78□□□□□ -1.32
HMCN1Q96RW7 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
HMCN1Q96RW7 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
HMCN1Q96RW7 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
HMCN1Q96RW7 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC6.78□□□□□ -1.32
HMCN1Q96RW7 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
HMCN1Q96RW7 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC6.78□□□□□ -1.32
HMCN1Q96RW7 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC6.78□□□□□ -1.32
HMCN1Q96RW7 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms