Protein–RNA interactions for Protein: Q96QR1

SCGB3A1, Secretoglobin family 3A member 1, humanhuman

Predictions only

Length 104 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCGB3A1Q96QR1 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC15.53■□□□□ 0.08
SCGB3A1Q96QR1 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC15.53■□□□□ 0.08
SCGB3A1Q96QR1 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
SCGB3A1Q96QR1 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SCGB3A1Q96QR1 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
SCGB3A1Q96QR1 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SCGB3A1Q96QR1 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
SCGB3A1Q96QR1 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
SCGB3A1Q96QR1 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC15.52■□□□□ 0.08
SCGB3A1Q96QR1 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC15.52■□□□□ 0.08
SCGB3A1Q96QR1 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC15.52■□□□□ 0.08
SCGB3A1Q96QR1 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC15.52■□□□□ 0.08
SCGB3A1Q96QR1 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
SCGB3A1Q96QR1 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
SCGB3A1Q96QR1 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
SCGB3A1Q96QR1 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
SCGB3A1Q96QR1 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
SCGB3A1Q96QR1 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
SCGB3A1Q96QR1 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
SCGB3A1Q96QR1 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
SCGB3A1Q96QR1 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
SCGB3A1Q96QR1 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC15.52■□□□□ 0.07
SCGB3A1Q96QR1 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
SCGB3A1Q96QR1 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.07
SCGB3A1Q96QR1 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC15.52■□□□□ 0.07
SCGB3A1Q96QR1 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
SCGB3A1Q96QR1 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC15.51■□□□□ 0.07
SCGB3A1Q96QR1 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
SCGB3A1Q96QR1 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC15.51■□□□□ 0.07
SCGB3A1Q96QR1 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SCGB3A1Q96QR1 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
SCGB3A1Q96QR1 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SCGB3A1Q96QR1 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SCGB3A1Q96QR1 AC244015.2-201ENST00000616358 1861 ntBASIC15.51■□□□□ 0.07
SCGB3A1Q96QR1 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SCGB3A1Q96QR1 AC016575.1-201ENST00000607026 382 ntBASIC15.51■□□□□ 0.07
SCGB3A1Q96QR1 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SCGB3A1Q96QR1 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
SCGB3A1Q96QR1 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
SCGB3A1Q96QR1 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SCGB3A1Q96QR1 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC15.51■□□□□ 0.07
SCGB3A1Q96QR1 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SCGB3A1Q96QR1 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC15.51■□□□□ 0.07
SCGB3A1Q96QR1 STX6-204ENST00000542060 4809 ntTSL 2 BASIC15.51■□□□□ 0.07
SCGB3A1Q96QR1 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
SCGB3A1Q96QR1 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SCGB3A1Q96QR1 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC15.51■□□□□ 0.07
SCGB3A1Q96QR1 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
SCGB3A1Q96QR1 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
SCGB3A1Q96QR1 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
SCGB3A1Q96QR1 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
SCGB3A1Q96QR1 AIRN-201ENST00000601203 4374 ntBASIC15.5■□□□□ 0.07
SCGB3A1Q96QR1 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC15.5■□□□□ 0.07
SCGB3A1Q96QR1 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
SCGB3A1Q96QR1 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
SCGB3A1Q96QR1 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
SCGB3A1Q96QR1 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
SCGB3A1Q96QR1 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
SCGB3A1Q96QR1 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
SCGB3A1Q96QR1 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
SCGB3A1Q96QR1 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC15.49■□□□□ 0.07
SCGB3A1Q96QR1 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
SCGB3A1Q96QR1 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
SCGB3A1Q96QR1 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
SCGB3A1Q96QR1 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
SCGB3A1Q96QR1 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
SCGB3A1Q96QR1 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
SCGB3A1Q96QR1 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
SCGB3A1Q96QR1 HES4-204ENST00000484667 667 ntTSL 3 BASIC15.49■□□□□ 0.07
SCGB3A1Q96QR1 MACF1-219ENST00000484793 834 ntTSL 2 BASIC15.49■□□□□ 0.07
SCGB3A1Q96QR1 AC022413.1-201ENST00000624602 984 ntBASIC15.49■□□□□ 0.07
SCGB3A1Q96QR1 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
SCGB3A1Q96QR1 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC15.49■□□□□ 0.07
SCGB3A1Q96QR1 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
SCGB3A1Q96QR1 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC15.49■□□□□ 0.07
SCGB3A1Q96QR1 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC15.49■□□□□ 0.07
SCGB3A1Q96QR1 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
SCGB3A1Q96QR1 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC15.49■□□□□ 0.07
SCGB3A1Q96QR1 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
SCGB3A1Q96QR1 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
SCGB3A1Q96QR1 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
SCGB3A1Q96QR1 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
SCGB3A1Q96QR1 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
SCGB3A1Q96QR1 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
SCGB3A1Q96QR1 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
SCGB3A1Q96QR1 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
SCGB3A1Q96QR1 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
SCGB3A1Q96QR1 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
SCGB3A1Q96QR1 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
SCGB3A1Q96QR1 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
SCGB3A1Q96QR1 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
SCGB3A1Q96QR1 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
SCGB3A1Q96QR1 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
SCGB3A1Q96QR1 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
SCGB3A1Q96QR1 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
SCGB3A1Q96QR1 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
SCGB3A1Q96QR1 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
SCGB3A1Q96QR1 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC15.47■□□□□ 0.07
SCGB3A1Q96QR1 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
SCGB3A1Q96QR1 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms