Protein–RNA interactions for Protein: Q96KF2

PRAC1, Small nuclear protein PRAC1, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAC1Q96KF2 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC10.7□□□□□ -0.7
PRAC1Q96KF2 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
PRAC1Q96KF2 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
PRAC1Q96KF2 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC10.7□□□□□ -0.7
PRAC1Q96KF2 BID-212ENST00000614949 1988 ntTSL 5 BASIC10.7□□□□□ -0.7
PRAC1Q96KF2 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
PRAC1Q96KF2 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
PRAC1Q96KF2 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC10.7□□□□□ -0.7
PRAC1Q96KF2 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC10.7□□□□□ -0.7
PRAC1Q96KF2 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
PRAC1Q96KF2 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
PRAC1Q96KF2 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC10.7□□□□□ -0.7
PRAC1Q96KF2 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC10.69□□□□□ -0.7
PRAC1Q96KF2 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
PRAC1Q96KF2 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
PRAC1Q96KF2 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
PRAC1Q96KF2 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
PRAC1Q96KF2 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC10.69□□□□□ -0.7
PRAC1Q96KF2 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
PRAC1Q96KF2 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC10.69□□□□□ -0.7
PRAC1Q96KF2 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
PRAC1Q96KF2 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
PRAC1Q96KF2 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
PRAC1Q96KF2 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
PRAC1Q96KF2 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC10.69□□□□□ -0.7
PRAC1Q96KF2 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC10.69□□□□□ -0.7
PRAC1Q96KF2 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
PRAC1Q96KF2 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
PRAC1Q96KF2 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC10.69□□□□□ -0.7
PRAC1Q96KF2 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
PRAC1Q96KF2 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
PRAC1Q96KF2 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC10.69□□□□□ -0.7
PRAC1Q96KF2 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
PRAC1Q96KF2 FBXW4P1-201ENST00000426721 2239 ntBASIC10.69□□□□□ -0.7
PRAC1Q96KF2 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
PRAC1Q96KF2 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
PRAC1Q96KF2 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC10.69□□□□□ -0.7
PRAC1Q96KF2 NEFHP1-201ENST00000412845 2629 ntBASIC10.69□□□□□ -0.7
PRAC1Q96KF2 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
PRAC1Q96KF2 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC10.68□□□□□ -0.7
PRAC1Q96KF2 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC10.68□□□□□ -0.7
PRAC1Q96KF2 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
PRAC1Q96KF2 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
PRAC1Q96KF2 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
PRAC1Q96KF2 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
PRAC1Q96KF2 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC10.68□□□□□ -0.7
PRAC1Q96KF2 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC10.68□□□□□ -0.7
PRAC1Q96KF2 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
PRAC1Q96KF2 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
PRAC1Q96KF2 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
PRAC1Q96KF2 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
PRAC1Q96KF2 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
PRAC1Q96KF2 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
PRAC1Q96KF2 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC10.68□□□□□ -0.7
PRAC1Q96KF2 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC10.68□□□□□ -0.7
PRAC1Q96KF2 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
PRAC1Q96KF2 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
PRAC1Q96KF2 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
PRAC1Q96KF2 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
PRAC1Q96KF2 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
PRAC1Q96KF2 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC10.68□□□□□ -0.7
PRAC1Q96KF2 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC10.68□□□□□ -0.7
PRAC1Q96KF2 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
PRAC1Q96KF2 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
PRAC1Q96KF2 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
PRAC1Q96KF2 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC10.67□□□□□ -0.7
PRAC1Q96KF2 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
PRAC1Q96KF2 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC10.67□□□□□ -0.7
PRAC1Q96KF2 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
PRAC1Q96KF2 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
PRAC1Q96KF2 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC10.67□□□□□ -0.7
PRAC1Q96KF2 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
PRAC1Q96KF2 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
PRAC1Q96KF2 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC10.67□□□□□ -0.7
PRAC1Q96KF2 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
PRAC1Q96KF2 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
PRAC1Q96KF2 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
PRAC1Q96KF2 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC10.67□□□□□ -0.7
PRAC1Q96KF2 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
PRAC1Q96KF2 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC10.67□□□□□ -0.7
PRAC1Q96KF2 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
PRAC1Q96KF2 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
PRAC1Q96KF2 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
PRAC1Q96KF2 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC10.67□□□□□ -0.7
PRAC1Q96KF2 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
PRAC1Q96KF2 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC10.67□□□□□ -0.7
PRAC1Q96KF2 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
PRAC1Q96KF2 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
PRAC1Q96KF2 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
PRAC1Q96KF2 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
PRAC1Q96KF2 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
PRAC1Q96KF2 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC10.66□□□□□ -0.7
PRAC1Q96KF2 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC10.66□□□□□ -0.7
PRAC1Q96KF2 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC10.66□□□□□ -0.7
PRAC1Q96KF2 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
PRAC1Q96KF2 AL032819.2-201ENST00000624543 2162 ntBASIC10.66□□□□□ -0.7
PRAC1Q96KF2 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC10.66□□□□□ -0.7
PRAC1Q96KF2 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC10.66□□□□□ -0.7
PRAC1Q96KF2 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
PRAC1Q96KF2 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC10.66□□□□□ -0.7
Retrieved 100 of 98,524 protein–RNA pairs in 16.8 ms