Protein–RNA interactions for Protein: Q96FZ7

CHMP6, Charged multivesicular body protein 6, humanhuman

Predictions only

Length 201 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6Q96FZ7 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC21.85■■□□□ 1.09
CHMP6Q96FZ7 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC21.84■■□□□ 1.09
CHMP6Q96FZ7 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CHMP6Q96FZ7 GOLGA2P6-201ENST00000340929 2049 ntBASIC21.84■■□□□ 1.09
CHMP6Q96FZ7 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CHMP6Q96FZ7 AC139795.1-202ENST00000500444 432 ntBASIC21.84■■□□□ 1.09
CHMP6Q96FZ7 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
CHMP6Q96FZ7 AC087393.1-201ENST00000582896 145 ntBASIC21.84■■□□□ 1.09
CHMP6Q96FZ7 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC21.84■■□□□ 1.09
CHMP6Q96FZ7 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC21.84■■□□□ 1.09
CHMP6Q96FZ7 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
CHMP6Q96FZ7 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CHMP6Q96FZ7 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC21.84■■□□□ 1.09
CHMP6Q96FZ7 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
CHMP6Q96FZ7 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC21.83■■□□□ 1.09
CHMP6Q96FZ7 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
CHMP6Q96FZ7 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.09
CHMP6Q96FZ7 RNF165-205ENST00000588679 2904 ntBASIC21.83■■□□□ 1.09
CHMP6Q96FZ7 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
CHMP6Q96FZ7 Z98882.1-201ENST00000622160 2253 ntBASIC21.83■■□□□ 1.09
CHMP6Q96FZ7 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
CHMP6Q96FZ7 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.08
CHMP6Q96FZ7 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC21.83■■□□□ 1.08
CHMP6Q96FZ7 AF106564.1-201ENST00000607058 2553 ntBASIC21.83■■□□□ 1.08
CHMP6Q96FZ7 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
CHMP6Q96FZ7 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
CHMP6Q96FZ7 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC21.82■■□□□ 1.08
CHMP6Q96FZ7 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC21.82■■□□□ 1.08
CHMP6Q96FZ7 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
CHMP6Q96FZ7 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC21.82■■□□□ 1.08
CHMP6Q96FZ7 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CHMP6Q96FZ7 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CHMP6Q96FZ7 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC21.82■■□□□ 1.08
CHMP6Q96FZ7 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC21.82■■□□□ 1.08
CHMP6Q96FZ7 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC21.82■■□□□ 1.08
CHMP6Q96FZ7 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC21.82■■□□□ 1.08
CHMP6Q96FZ7 BHLHE23-202ENST00000612929 1109 ntBASIC21.82■■□□□ 1.08
CHMP6Q96FZ7 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC21.82■■□□□ 1.08
CHMP6Q96FZ7 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
CHMP6Q96FZ7 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
CHMP6Q96FZ7 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC21.82■■□□□ 1.08
CHMP6Q96FZ7 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC21.81■■□□□ 1.08
CHMP6Q96FZ7 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
CHMP6Q96FZ7 FEM1AP4-201ENST00000443167 1987 ntBASIC21.81■■□□□ 1.08
CHMP6Q96FZ7 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC21.81■■□□□ 1.08
CHMP6Q96FZ7 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC21.81■■□□□ 1.08
CHMP6Q96FZ7 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC21.81■■□□□ 1.08
CHMP6Q96FZ7 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CHMP6Q96FZ7 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CHMP6Q96FZ7 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
CHMP6Q96FZ7 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CHMP6Q96FZ7 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CHMP6Q96FZ7 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
CHMP6Q96FZ7 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC21.8■■□□□ 1.08
CHMP6Q96FZ7 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
CHMP6Q96FZ7 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CHMP6Q96FZ7 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
CHMP6Q96FZ7 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
CHMP6Q96FZ7 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CHMP6Q96FZ7 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
CHMP6Q96FZ7 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CHMP6Q96FZ7 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
CHMP6Q96FZ7 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CHMP6Q96FZ7 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC21.8■■□□□ 1.08
CHMP6Q96FZ7 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CHMP6Q96FZ7 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
CHMP6Q96FZ7 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
CHMP6Q96FZ7 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CHMP6Q96FZ7 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CHMP6Q96FZ7 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC21.79■■□□□ 1.08
CHMP6Q96FZ7 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
CHMP6Q96FZ7 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
CHMP6Q96FZ7 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC21.79■■□□□ 1.08
CHMP6Q96FZ7 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC21.79■■□□□ 1.08
CHMP6Q96FZ7 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC21.79■■□□□ 1.08
CHMP6Q96FZ7 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CHMP6Q96FZ7 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CHMP6Q96FZ7 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
CHMP6Q96FZ7 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
CHMP6Q96FZ7 TUB-203ENST00000534099 1759 ntTSL 2 BASIC21.79■■□□□ 1.08
CHMP6Q96FZ7 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
CHMP6Q96FZ7 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC21.79■■□□□ 1.08
CHMP6Q96FZ7 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
CHMP6Q96FZ7 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
CHMP6Q96FZ7 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CHMP6Q96FZ7 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CHMP6Q96FZ7 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC21.78■■□□□ 1.08
CHMP6Q96FZ7 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
CHMP6Q96FZ7 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC21.78■■□□□ 1.08
CHMP6Q96FZ7 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
CHMP6Q96FZ7 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
CHMP6Q96FZ7 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
CHMP6Q96FZ7 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CHMP6Q96FZ7 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
CHMP6Q96FZ7 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC21.77■■□□□ 1.08
CHMP6Q96FZ7 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CHMP6Q96FZ7 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CHMP6Q96FZ7 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC21.77■■□□□ 1.08
CHMP6Q96FZ7 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CHMP6Q96FZ7 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms