Protein–RNA interactions for Protein: Q96FN4

CPNE2, Copine-2, humanhuman

Predicted RBP Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE2Q96FN4 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CPNE2Q96FN4 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC18.81■□□□□ 0.6
CPNE2Q96FN4 AC010997.5-201ENST00000609182 354 ntBASIC18.81■□□□□ 0.6
CPNE2Q96FN4 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
CPNE2Q96FN4 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CPNE2Q96FN4 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CPNE2Q96FN4 AC009102.2-201ENST00000606772 1639 ntBASIC18.81■□□□□ 0.6
CPNE2Q96FN4 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
CPNE2Q96FN4 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CPNE2Q96FN4 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CPNE2Q96FN4 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC18.8■□□□□ 0.6
CPNE2Q96FN4 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
CPNE2Q96FN4 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CPNE2Q96FN4 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CPNE2Q96FN4 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC18.8■□□□□ 0.6
CPNE2Q96FN4 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC18.8■□□□□ 0.6
CPNE2Q96FN4 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CPNE2Q96FN4 AC080038.3-201ENST00000623346 1952 ntBASIC18.8■□□□□ 0.6
CPNE2Q96FN4 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CPNE2Q96FN4 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC18.8■□□□□ 0.6
CPNE2Q96FN4 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CPNE2Q96FN4 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC18.8■□□□□ 0.6
CPNE2Q96FN4 AC007375.3-201ENST00000600936 2314 ntBASIC18.79■□□□□ 0.6
CPNE2Q96FN4 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
CPNE2Q96FN4 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CPNE2Q96FN4 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CPNE2Q96FN4 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CPNE2Q96FN4 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CPNE2Q96FN4 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CPNE2Q96FN4 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CPNE2Q96FN4 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
CPNE2Q96FN4 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
CPNE2Q96FN4 NKILA-201ENST00000613231 537 ntTSL 4 BASIC18.79■□□□□ 0.6
CPNE2Q96FN4 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
CPNE2Q96FN4 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CPNE2Q96FN4 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CPNE2Q96FN4 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC18.78■□□□□ 0.6
CPNE2Q96FN4 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC18.78■□□□□ 0.6
CPNE2Q96FN4 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
CPNE2Q96FN4 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
CPNE2Q96FN4 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CPNE2Q96FN4 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
CPNE2Q96FN4 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC18.78■□□□□ 0.6
CPNE2Q96FN4 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
CPNE2Q96FN4 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CPNE2Q96FN4 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC18.78■□□□□ 0.6
CPNE2Q96FN4 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CPNE2Q96FN4 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
CPNE2Q96FN4 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CPNE2Q96FN4 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC18.77■□□□□ 0.6
CPNE2Q96FN4 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC18.77■□□□□ 0.6
CPNE2Q96FN4 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC18.77■□□□□ 0.6
CPNE2Q96FN4 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC18.77■□□□□ 0.6
CPNE2Q96FN4 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CPNE2Q96FN4 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CPNE2Q96FN4 C17orf82-201ENST00000623772 1530 ntBASIC18.77■□□□□ 0.6
CPNE2Q96FN4 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC18.77■□□□□ 0.6
CPNE2Q96FN4 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC18.77■□□□□ 0.6
CPNE2Q96FN4 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC18.77■□□□□ 0.59
CPNE2Q96FN4 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
CPNE2Q96FN4 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
CPNE2Q96FN4 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC18.77■□□□□ 0.59
CPNE2Q96FN4 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC18.77■□□□□ 0.59
CPNE2Q96FN4 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
CPNE2Q96FN4 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
CPNE2Q96FN4 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CPNE2Q96FN4 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CPNE2Q96FN4 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CPNE2Q96FN4 AC004687.1-201ENST00000579003 1625 ntBASIC18.76■□□□□ 0.59
CPNE2Q96FN4 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC18.76■□□□□ 0.59
CPNE2Q96FN4 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC18.76■□□□□ 0.59
CPNE2Q96FN4 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CPNE2Q96FN4 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CPNE2Q96FN4 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
CPNE2Q96FN4 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
CPNE2Q96FN4 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CPNE2Q96FN4 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC18.76■□□□□ 0.59
CPNE2Q96FN4 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CPNE2Q96FN4 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
CPNE2Q96FN4 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CPNE2Q96FN4 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC18.75■□□□□ 0.59
CPNE2Q96FN4 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC18.75■□□□□ 0.59
CPNE2Q96FN4 VGF-203ENST00000611537 1622 ntTSL 5 BASIC18.75■□□□□ 0.59
CPNE2Q96FN4 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC18.75■□□□□ 0.59
CPNE2Q96FN4 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CPNE2Q96FN4 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC18.75■□□□□ 0.59
CPNE2Q96FN4 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CPNE2Q96FN4 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
CPNE2Q96FN4 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC18.75■□□□□ 0.59
CPNE2Q96FN4 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CPNE2Q96FN4 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC18.74■□□□□ 0.59
CPNE2Q96FN4 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CPNE2Q96FN4 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CPNE2Q96FN4 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CPNE2Q96FN4 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC18.74■□□□□ 0.59
CPNE2Q96FN4 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CPNE2Q96FN4 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CPNE2Q96FN4 TSPY9P-201ENST00000440215 945 ntBASIC18.74■□□□□ 0.59
CPNE2Q96FN4 TSPY11P-201ENST00000442607 1045 ntBASIC18.74■□□□□ 0.59
CPNE2Q96FN4 AC239859.2-201ENST00000444165 318 ntBASIC18.74■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms