Protein–RNA interactions for Protein: Q96FL8

SLC47A1, Multidrug and toxin extrusion protein 1, humanhuman

Predictions only

Length 570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC47A1Q96FL8 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SLC47A1Q96FL8 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SLC47A1Q96FL8 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC20.45■□□□□ 0.86
SLC47A1Q96FL8 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
SLC47A1Q96FL8 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC20.45■□□□□ 0.86
SLC47A1Q96FL8 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
SLC47A1Q96FL8 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
SLC47A1Q96FL8 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
SLC47A1Q96FL8 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
SLC47A1Q96FL8 AC005229.4-201ENST00000610085 2198 ntBASIC20.45■□□□□ 0.86
SLC47A1Q96FL8 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
SLC47A1Q96FL8 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC20.44■□□□□ 0.86
SLC47A1Q96FL8 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
SLC47A1Q96FL8 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC20.44■□□□□ 0.86
SLC47A1Q96FL8 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
SLC47A1Q96FL8 AC092028.1-203ENST00000608262 953 ntBASIC20.44■□□□□ 0.86
SLC47A1Q96FL8 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
SLC47A1Q96FL8 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SLC47A1Q96FL8 SLC25A24-204ENST00000569674 2357 ntBASIC20.44■□□□□ 0.86
SLC47A1Q96FL8 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC20.44■□□□□ 0.86
SLC47A1Q96FL8 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
SLC47A1Q96FL8 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC20.43■□□□□ 0.86
SLC47A1Q96FL8 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
SLC47A1Q96FL8 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC20.43■□□□□ 0.86
SLC47A1Q96FL8 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SLC47A1Q96FL8 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
SLC47A1Q96FL8 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC20.43■□□□□ 0.86
SLC47A1Q96FL8 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SLC47A1Q96FL8 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SLC47A1Q96FL8 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC20.43■□□□□ 0.86
SLC47A1Q96FL8 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC20.43■□□□□ 0.86
SLC47A1Q96FL8 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC20.43■□□□□ 0.86
SLC47A1Q96FL8 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
SLC47A1Q96FL8 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC20.42■□□□□ 0.86
SLC47A1Q96FL8 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SLC47A1Q96FL8 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
SLC47A1Q96FL8 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC20.42■□□□□ 0.86
SLC47A1Q96FL8 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC20.42■□□□□ 0.86
SLC47A1Q96FL8 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC20.42■□□□□ 0.86
SLC47A1Q96FL8 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC20.42■□□□□ 0.86
SLC47A1Q96FL8 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SLC47A1Q96FL8 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
SLC47A1Q96FL8 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
SLC47A1Q96FL8 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC20.42■□□□□ 0.86
SLC47A1Q96FL8 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
SLC47A1Q96FL8 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
SLC47A1Q96FL8 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC20.41■□□□□ 0.86
SLC47A1Q96FL8 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SLC47A1Q96FL8 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC20.41■□□□□ 0.86
SLC47A1Q96FL8 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
SLC47A1Q96FL8 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SLC47A1Q96FL8 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
SLC47A1Q96FL8 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC20.41■□□□□ 0.86
SLC47A1Q96FL8 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC20.41■□□□□ 0.86
SLC47A1Q96FL8 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
SLC47A1Q96FL8 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
SLC47A1Q96FL8 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC20.41■□□□□ 0.86
SLC47A1Q96FL8 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
SLC47A1Q96FL8 FP325331.1-202ENST00000623531 1380 ntBASIC20.41■□□□□ 0.86
SLC47A1Q96FL8 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
SLC47A1Q96FL8 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC20.41■□□□□ 0.86
SLC47A1Q96FL8 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
SLC47A1Q96FL8 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SLC47A1Q96FL8 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC20.41■□□□□ 0.86
SLC47A1Q96FL8 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
SLC47A1Q96FL8 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SLC47A1Q96FL8 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SLC47A1Q96FL8 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC20.4■□□□□ 0.86
SLC47A1Q96FL8 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC20.4■□□□□ 0.86
SLC47A1Q96FL8 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
SLC47A1Q96FL8 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
SLC47A1Q96FL8 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
SLC47A1Q96FL8 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SLC47A1Q96FL8 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC20.4■□□□□ 0.86
SLC47A1Q96FL8 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
SLC47A1Q96FL8 MIR4787-201ENST00000607364 84 ntBASIC20.4■□□□□ 0.86
SLC47A1Q96FL8 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC20.4■□□□□ 0.86
SLC47A1Q96FL8 AC244015.2-201ENST00000616358 1861 ntBASIC20.4■□□□□ 0.86
SLC47A1Q96FL8 AC009086.3-201ENST00000623486 1008 ntBASIC20.4■□□□□ 0.86
SLC47A1Q96FL8 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC20.4■□□□□ 0.86
SLC47A1Q96FL8 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC20.4■□□□□ 0.86
SLC47A1Q96FL8 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SLC47A1Q96FL8 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
SLC47A1Q96FL8 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
SLC47A1Q96FL8 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC20.39■□□□□ 0.86
SLC47A1Q96FL8 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
SLC47A1Q96FL8 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC20.39■□□□□ 0.86
SLC47A1Q96FL8 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
SLC47A1Q96FL8 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
SLC47A1Q96FL8 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC20.39■□□□□ 0.86
SLC47A1Q96FL8 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SLC47A1Q96FL8 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SLC47A1Q96FL8 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SLC47A1Q96FL8 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SLC47A1Q96FL8 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SLC47A1Q96FL8 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SLC47A1Q96FL8 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC20.39■□□□□ 0.85
SLC47A1Q96FL8 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.85
SLC47A1Q96FL8 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SLC47A1Q96FL8 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 14 ms