Protein–RNA interactions for Protein: Q92529

SHC3, SHC-transforming protein 3, humanhuman

Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC3Q92529 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC23.31■■□□□ 1.32
SHC3Q92529 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
SHC3Q92529 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC23.3■■□□□ 1.32
SHC3Q92529 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
SHC3Q92529 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC23.3■■□□□ 1.32
SHC3Q92529 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
SHC3Q92529 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC23.3■■□□□ 1.32
SHC3Q92529 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
SHC3Q92529 PTMA-205ENST00000410064 814 ntTSL 2 BASIC23.3■■□□□ 1.32
SHC3Q92529 SLC47A1P1-202ENST00000449666 945 ntBASIC23.3■■□□□ 1.32
SHC3Q92529 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC23.3■■□□□ 1.32
SHC3Q92529 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
SHC3Q92529 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC23.3■■□□□ 1.32
SHC3Q92529 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
SHC3Q92529 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
SHC3Q92529 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC23.3■■□□□ 1.32
SHC3Q92529 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
SHC3Q92529 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC23.3■■□□□ 1.32
SHC3Q92529 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
SHC3Q92529 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
SHC3Q92529 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC23.29■■□□□ 1.32
SHC3Q92529 UNC93B3-201ENST00000308076 687 ntBASIC23.29■■□□□ 1.32
SHC3Q92529 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
SHC3Q92529 AC079089.2-201ENST00000531211 1277 ntBASIC23.29■■□□□ 1.32
SHC3Q92529 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
SHC3Q92529 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
SHC3Q92529 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC23.29■■□□□ 1.32
SHC3Q92529 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
SHC3Q92529 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
SHC3Q92529 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC23.29■■□□□ 1.32
SHC3Q92529 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC23.29■■□□□ 1.32
SHC3Q92529 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
SHC3Q92529 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
SHC3Q92529 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
SHC3Q92529 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC23.28■■□□□ 1.32
SHC3Q92529 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC23.28■■□□□ 1.32
SHC3Q92529 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
SHC3Q92529 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC23.28■■□□□ 1.32
SHC3Q92529 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
SHC3Q92529 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC23.28■■□□□ 1.32
SHC3Q92529 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
SHC3Q92529 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC23.28■■□□□ 1.32
SHC3Q92529 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC23.28■■□□□ 1.32
SHC3Q92529 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC23.28■■□□□ 1.32
SHC3Q92529 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC23.28■■□□□ 1.32
SHC3Q92529 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC23.28■■□□□ 1.32
SHC3Q92529 AC008406.3-201ENST00000620001 1374 ntBASIC23.27■■□□□ 1.32
SHC3Q92529 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC23.27■■□□□ 1.32
SHC3Q92529 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC23.27■■□□□ 1.32
SHC3Q92529 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC23.27■■□□□ 1.32
SHC3Q92529 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
SHC3Q92529 PEMT-206ENST00000435340 960 ntTSL 5 BASIC23.27■■□□□ 1.32
SHC3Q92529 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC23.27■■□□□ 1.32
SHC3Q92529 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
SHC3Q92529 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC23.26■■□□□ 1.31
SHC3Q92529 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC23.26■■□□□ 1.31
SHC3Q92529 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
SHC3Q92529 AC010141.3-201ENST00000456659 717 ntBASIC23.26■■□□□ 1.31
SHC3Q92529 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC23.26■■□□□ 1.31
SHC3Q92529 AC024257.2-201ENST00000549699 147 ntBASIC23.26■■□□□ 1.31
SHC3Q92529 MIR4767-201ENST00000582827 78 ntBASIC23.26■■□□□ 1.31
SHC3Q92529 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC23.26■■□□□ 1.31
SHC3Q92529 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
SHC3Q92529 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC23.26■■□□□ 1.31
SHC3Q92529 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
SHC3Q92529 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
SHC3Q92529 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC23.25■■□□□ 1.31
SHC3Q92529 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC23.25■■□□□ 1.31
SHC3Q92529 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC23.25■■□□□ 1.31
SHC3Q92529 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
SHC3Q92529 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
SHC3Q92529 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
SHC3Q92529 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC23.25■■□□□ 1.31
SHC3Q92529 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
SHC3Q92529 AL136162.1-201ENST00000607711 1078 ntBASIC23.25■■□□□ 1.31
SHC3Q92529 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
SHC3Q92529 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC23.25■■□□□ 1.31
SHC3Q92529 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC23.25■■□□□ 1.31
SHC3Q92529 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC23.25■■□□□ 1.31
SHC3Q92529 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC23.25■■□□□ 1.31
SHC3Q92529 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC23.24■■□□□ 1.31
SHC3Q92529 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
SHC3Q92529 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
SHC3Q92529 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC23.24■■□□□ 1.31
SHC3Q92529 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC23.24■■□□□ 1.31
SHC3Q92529 AP005435.1-201ENST00000529293 1178 ntBASIC23.24■■□□□ 1.31
SHC3Q92529 AC087239.1-201ENST00000622671 572 ntBASIC23.24■■□□□ 1.31
SHC3Q92529 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
SHC3Q92529 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
SHC3Q92529 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC23.24■■□□□ 1.31
SHC3Q92529 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
SHC3Q92529 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC23.24■■□□□ 1.31
SHC3Q92529 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC23.24■■□□□ 1.31
SHC3Q92529 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC23.23■■□□□ 1.31
SHC3Q92529 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC23.23■■□□□ 1.31
SHC3Q92529 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC23.23■■□□□ 1.31
SHC3Q92529 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC23.23■■□□□ 1.31
SHC3Q92529 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
SHC3Q92529 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
SHC3Q92529 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC23.23■■□□□ 1.31
Retrieved 100 of 98,524 protein–RNA pairs in 50.4 ms