Protein–RNA interactions for Protein: Q8WVM8

SCFD1, Sec1 family domain-containing protein 1, humanhuman

Predictions only

Length 642 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1Q8WVM8 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC24■■□□□ 1.43
SCFD1Q8WVM8 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC24■■□□□ 1.43
SCFD1Q8WVM8 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC24■■□□□ 1.43
SCFD1Q8WVM8 AC068587.7-201ENST00000641602 218 ntBASIC24■■□□□ 1.43
SCFD1Q8WVM8 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC24■■□□□ 1.43
SCFD1Q8WVM8 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC24■■□□□ 1.43
SCFD1Q8WVM8 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC24■■□□□ 1.43
SCFD1Q8WVM8 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC24■■□□□ 1.43
SCFD1Q8WVM8 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC24■■□□□ 1.43
SCFD1Q8WVM8 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC24■■□□□ 1.43
SCFD1Q8WVM8 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
SCFD1Q8WVM8 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
SCFD1Q8WVM8 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC23.99■■□□□ 1.43
SCFD1Q8WVM8 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC23.99■■□□□ 1.43
SCFD1Q8WVM8 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC23.99■■□□□ 1.43
SCFD1Q8WVM8 AC110285.6-201ENST00000617652 491 ntBASIC23.99■■□□□ 1.43
SCFD1Q8WVM8 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
SCFD1Q8WVM8 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC23.99■■□□□ 1.43
SCFD1Q8WVM8 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC23.98■■□□□ 1.43
SCFD1Q8WVM8 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC23.98■■□□□ 1.43
SCFD1Q8WVM8 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC23.98■■□□□ 1.43
SCFD1Q8WVM8 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC23.98■■□□□ 1.43
SCFD1Q8WVM8 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC23.98■■□□□ 1.43
SCFD1Q8WVM8 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC23.98■■□□□ 1.43
SCFD1Q8WVM8 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
SCFD1Q8WVM8 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
SCFD1Q8WVM8 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC23.98■■□□□ 1.43
SCFD1Q8WVM8 MYB-221ENST00000527615 2381 ntTSL 5 BASIC23.98■■□□□ 1.43
SCFD1Q8WVM8 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC23.97■■□□□ 1.43
SCFD1Q8WVM8 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
SCFD1Q8WVM8 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
SCFD1Q8WVM8 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC23.97■■□□□ 1.43
SCFD1Q8WVM8 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
SCFD1Q8WVM8 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
SCFD1Q8WVM8 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
SCFD1Q8WVM8 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC23.96■■□□□ 1.43
SCFD1Q8WVM8 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
SCFD1Q8WVM8 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
SCFD1Q8WVM8 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC23.96■■□□□ 1.43
SCFD1Q8WVM8 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC23.96■■□□□ 1.43
SCFD1Q8WVM8 PBX2P1-201ENST00000493219 1291 ntBASIC23.96■■□□□ 1.43
SCFD1Q8WVM8 AC079089.2-201ENST00000531211 1277 ntBASIC23.96■■□□□ 1.43
SCFD1Q8WVM8 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC23.96■■□□□ 1.43
SCFD1Q8WVM8 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC23.96■■□□□ 1.43
SCFD1Q8WVM8 AC106739.1-201ENST00000617035 715 ntBASIC23.96■■□□□ 1.43
SCFD1Q8WVM8 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
SCFD1Q8WVM8 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
SCFD1Q8WVM8 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC23.96■■□□□ 1.43
SCFD1Q8WVM8 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
SCFD1Q8WVM8 LINC00565-201ENST00000562710 2331 ntBASIC23.95■■□□□ 1.43
SCFD1Q8WVM8 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC23.95■■□□□ 1.42
SCFD1Q8WVM8 AC019069.1-201ENST00000610008 1333 ntBASIC23.95■■□□□ 1.42
SCFD1Q8WVM8 BX842568.3-201ENST00000418104 571 ntBASIC23.95■■□□□ 1.42
SCFD1Q8WVM8 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC23.95■■□□□ 1.42
SCFD1Q8WVM8 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
SCFD1Q8WVM8 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
SCFD1Q8WVM8 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC23.94■■□□□ 1.42
SCFD1Q8WVM8 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
SCFD1Q8WVM8 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC23.94■■□□□ 1.42
SCFD1Q8WVM8 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
SCFD1Q8WVM8 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC23.94■■□□□ 1.42
SCFD1Q8WVM8 AC010141.3-201ENST00000456659 717 ntBASIC23.94■■□□□ 1.42
SCFD1Q8WVM8 AP005435.1-201ENST00000529293 1178 ntBASIC23.94■■□□□ 1.42
SCFD1Q8WVM8 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC23.94■■□□□ 1.42
SCFD1Q8WVM8 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
SCFD1Q8WVM8 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
SCFD1Q8WVM8 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
SCFD1Q8WVM8 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC23.94■■□□□ 1.42
SCFD1Q8WVM8 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
SCFD1Q8WVM8 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC23.94■■□□□ 1.42
SCFD1Q8WVM8 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
SCFD1Q8WVM8 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC23.94■■□□□ 1.42
SCFD1Q8WVM8 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC23.93■■□□□ 1.42
SCFD1Q8WVM8 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC23.93■■□□□ 1.42
SCFD1Q8WVM8 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC23.93■■□□□ 1.42
SCFD1Q8WVM8 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
SCFD1Q8WVM8 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
SCFD1Q8WVM8 C11orf96-202ENST00000528572 1834 ntBASIC23.93■■□□□ 1.42
SCFD1Q8WVM8 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
SCFD1Q8WVM8 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC23.93■■□□□ 1.42
SCFD1Q8WVM8 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC23.93■■□□□ 1.42
SCFD1Q8WVM8 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC23.92■■□□□ 1.42
SCFD1Q8WVM8 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC23.92■■□□□ 1.42
SCFD1Q8WVM8 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
SCFD1Q8WVM8 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
SCFD1Q8WVM8 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC23.92■■□□□ 1.42
SCFD1Q8WVM8 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC23.92■■□□□ 1.42
SCFD1Q8WVM8 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC23.92■■□□□ 1.42
SCFD1Q8WVM8 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC23.92■■□□□ 1.42
SCFD1Q8WVM8 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC23.92■■□□□ 1.42
SCFD1Q8WVM8 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
SCFD1Q8WVM8 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC23.92■■□□□ 1.42
SCFD1Q8WVM8 AC233992.3-201ENST00000607491 485 ntBASIC23.92■■□□□ 1.42
SCFD1Q8WVM8 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC23.92■■□□□ 1.42
SCFD1Q8WVM8 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
SCFD1Q8WVM8 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC23.92■■□□□ 1.42
SCFD1Q8WVM8 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC23.92■■□□□ 1.42
SCFD1Q8WVM8 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
SCFD1Q8WVM8 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC23.91■■□□□ 1.42
SCFD1Q8WVM8 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC23.91■■□□□ 1.42
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms