Protein–RNA interactions for Protein: Q8NFU0

BEST4, Bestrophin-4, humanhuman

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST4Q8NFU0 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC18.7■□□□□ 0.58
BEST4Q8NFU0 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC18.7■□□□□ 0.58
BEST4Q8NFU0 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
BEST4Q8NFU0 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
BEST4Q8NFU0 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
BEST4Q8NFU0 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
BEST4Q8NFU0 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
BEST4Q8NFU0 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
BEST4Q8NFU0 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
BEST4Q8NFU0 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC18.69■□□□□ 0.58
BEST4Q8NFU0 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
BEST4Q8NFU0 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
BEST4Q8NFU0 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
BEST4Q8NFU0 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC18.69■□□□□ 0.58
BEST4Q8NFU0 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC18.69■□□□□ 0.58
BEST4Q8NFU0 U85056.1-201ENST00000616429 682 ntBASIC18.69■□□□□ 0.58
BEST4Q8NFU0 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
BEST4Q8NFU0 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC18.69■□□□□ 0.58
BEST4Q8NFU0 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
BEST4Q8NFU0 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
BEST4Q8NFU0 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
BEST4Q8NFU0 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
BEST4Q8NFU0 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
BEST4Q8NFU0 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
BEST4Q8NFU0 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
BEST4Q8NFU0 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
BEST4Q8NFU0 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
BEST4Q8NFU0 MTX2-204ENST00000443241 799 ntTSL 3 BASIC18.68■□□□□ 0.58
BEST4Q8NFU0 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
BEST4Q8NFU0 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
BEST4Q8NFU0 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC18.68■□□□□ 0.58
BEST4Q8NFU0 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC18.68■□□□□ 0.58
BEST4Q8NFU0 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
BEST4Q8NFU0 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
BEST4Q8NFU0 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
BEST4Q8NFU0 USF2-207ENST00000595068 1612 ntTSL 5 BASIC18.67■□□□□ 0.58
BEST4Q8NFU0 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
BEST4Q8NFU0 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
BEST4Q8NFU0 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC18.67■□□□□ 0.58
BEST4Q8NFU0 AC004448.1-201ENST00000458332 883 ntBASIC18.67■□□□□ 0.58
BEST4Q8NFU0 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC18.67■□□□□ 0.58
BEST4Q8NFU0 AC139795.1-202ENST00000500444 432 ntBASIC18.67■□□□□ 0.58
BEST4Q8NFU0 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC18.67■□□□□ 0.58
BEST4Q8NFU0 AC120024.1-201ENST00000562672 995 ntBASIC18.67■□□□□ 0.58
BEST4Q8NFU0 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
BEST4Q8NFU0 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
BEST4Q8NFU0 AF131216.4-201ENST00000638924 1588 ntBASIC18.67■□□□□ 0.58
BEST4Q8NFU0 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
BEST4Q8NFU0 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
BEST4Q8NFU0 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC18.66■□□□□ 0.58
BEST4Q8NFU0 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
BEST4Q8NFU0 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
BEST4Q8NFU0 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC18.66■□□□□ 0.58
BEST4Q8NFU0 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC18.66■□□□□ 0.58
BEST4Q8NFU0 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC18.66■□□□□ 0.58
BEST4Q8NFU0 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
BEST4Q8NFU0 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
BEST4Q8NFU0 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC18.66■□□□□ 0.58
BEST4Q8NFU0 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
BEST4Q8NFU0 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC18.65■□□□□ 0.58
BEST4Q8NFU0 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
BEST4Q8NFU0 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
BEST4Q8NFU0 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC18.65■□□□□ 0.58
BEST4Q8NFU0 AC087742.1-201ENST00000575880 1738 ntBASIC18.65■□□□□ 0.58
BEST4Q8NFU0 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
BEST4Q8NFU0 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
BEST4Q8NFU0 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC18.65■□□□□ 0.58
BEST4Q8NFU0 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
BEST4Q8NFU0 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
BEST4Q8NFU0 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.58
BEST4Q8NFU0 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC18.64■□□□□ 0.58
BEST4Q8NFU0 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.58
BEST4Q8NFU0 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
BEST4Q8NFU0 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC18.64■□□□□ 0.58
BEST4Q8NFU0 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC18.64■□□□□ 0.57
BEST4Q8NFU0 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
BEST4Q8NFU0 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
BEST4Q8NFU0 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC18.64■□□□□ 0.57
BEST4Q8NFU0 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
BEST4Q8NFU0 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
BEST4Q8NFU0 RARRES2P2-201ENST00000394842 485 ntBASIC18.64■□□□□ 0.57
BEST4Q8NFU0 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
BEST4Q8NFU0 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
BEST4Q8NFU0 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
BEST4Q8NFU0 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC18.64■□□□□ 0.57
BEST4Q8NFU0 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
BEST4Q8NFU0 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
BEST4Q8NFU0 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
BEST4Q8NFU0 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
BEST4Q8NFU0 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
BEST4Q8NFU0 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
BEST4Q8NFU0 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
BEST4Q8NFU0 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC18.63■□□□□ 0.57
BEST4Q8NFU0 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
BEST4Q8NFU0 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC18.63■□□□□ 0.57
BEST4Q8NFU0 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
BEST4Q8NFU0 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
BEST4Q8NFU0 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
BEST4Q8NFU0 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
BEST4Q8NFU0 KRT18P60-201ENST00000312876 1297 ntBASIC18.63■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 359.8 ms