Protein–RNA interactions for Protein: Q8NDX2

SLC17A8, Vesicular glutamate transporter 3, humanhuman

Predictions only

Length 589 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC17A8Q8NDX2 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
SLC17A8Q8NDX2 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC24.44■■□□□ 1.5
SLC17A8Q8NDX2 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC24.44■■□□□ 1.5
SLC17A8Q8NDX2 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC24.44■■□□□ 1.5
SLC17A8Q8NDX2 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
SLC17A8Q8NDX2 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC24.44■■□□□ 1.5
SLC17A8Q8NDX2 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC24.44■■□□□ 1.5
SLC17A8Q8NDX2 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC24.44■■□□□ 1.5
SLC17A8Q8NDX2 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC24.44■■□□□ 1.5
SLC17A8Q8NDX2 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC24.44■■□□□ 1.5
SLC17A8Q8NDX2 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC24.44■■□□□ 1.5
SLC17A8Q8NDX2 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC24.44■■□□□ 1.5
SLC17A8Q8NDX2 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC24.43■■□□□ 1.5
SLC17A8Q8NDX2 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
SLC17A8Q8NDX2 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
SLC17A8Q8NDX2 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC24.43■■□□□ 1.5
SLC17A8Q8NDX2 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC24.43■■□□□ 1.5
SLC17A8Q8NDX2 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
SLC17A8Q8NDX2 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
SLC17A8Q8NDX2 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC24.43■■□□□ 1.5
SLC17A8Q8NDX2 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
SLC17A8Q8NDX2 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC24.43■■□□□ 1.5
SLC17A8Q8NDX2 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC24.43■■□□□ 1.5
SLC17A8Q8NDX2 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC24.43■■□□□ 1.5
SLC17A8Q8NDX2 AC137761.2-201ENST00000561729 223 ntBASIC24.43■■□□□ 1.5
SLC17A8Q8NDX2 AC145350.3-201ENST00000569033 163 ntBASIC24.43■■□□□ 1.5
SLC17A8Q8NDX2 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC24.43■■□□□ 1.5
SLC17A8Q8NDX2 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
SLC17A8Q8NDX2 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC24.43■■□□□ 1.5
SLC17A8Q8NDX2 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC24.43■■□□□ 1.5
SLC17A8Q8NDX2 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC24.43■■□□□ 1.5
SLC17A8Q8NDX2 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
SLC17A8Q8NDX2 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
SLC17A8Q8NDX2 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC24.43■■□□□ 1.5
SLC17A8Q8NDX2 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC24.43■■□□□ 1.5
SLC17A8Q8NDX2 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
SLC17A8Q8NDX2 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC24.43■■□□□ 1.5
SLC17A8Q8NDX2 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC24.42■■□□□ 1.5
SLC17A8Q8NDX2 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
SLC17A8Q8NDX2 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC24.42■■□□□ 1.5
SLC17A8Q8NDX2 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC24.42■■□□□ 1.5
SLC17A8Q8NDX2 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
SLC17A8Q8NDX2 TSPY26P-201ENST00000476365 1326 ntBASIC24.42■■□□□ 1.5
SLC17A8Q8NDX2 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
SLC17A8Q8NDX2 AC133637.1-201ENST00000624115 1537 ntBASIC24.42■■□□□ 1.5
SLC17A8Q8NDX2 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC24.42■■□□□ 1.5
SLC17A8Q8NDX2 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC24.42■■□□□ 1.5
SLC17A8Q8NDX2 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC24.42■■□□□ 1.5
SLC17A8Q8NDX2 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC24.42■■□□□ 1.5
SLC17A8Q8NDX2 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC24.41■■□□□ 1.5
SLC17A8Q8NDX2 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC24.41■■□□□ 1.5
SLC17A8Q8NDX2 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
SLC17A8Q8NDX2 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC24.41■■□□□ 1.5
SLC17A8Q8NDX2 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC24.41■■□□□ 1.5
SLC17A8Q8NDX2 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC24.4■■□□□ 1.5
SLC17A8Q8NDX2 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
SLC17A8Q8NDX2 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
SLC17A8Q8NDX2 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
SLC17A8Q8NDX2 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC24.4■■□□□ 1.5
SLC17A8Q8NDX2 AC142086.2-201ENST00000569753 217 ntBASIC24.4■■□□□ 1.5
SLC17A8Q8NDX2 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC24.4■■□□□ 1.5
SLC17A8Q8NDX2 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
SLC17A8Q8NDX2 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC24.4■■□□□ 1.5
SLC17A8Q8NDX2 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC24.4■■□□□ 1.5
SLC17A8Q8NDX2 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC24.4■■□□□ 1.5
SLC17A8Q8NDX2 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC24.4■■□□□ 1.5
SLC17A8Q8NDX2 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
SLC17A8Q8NDX2 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC24.39■■□□□ 1.5
SLC17A8Q8NDX2 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
SLC17A8Q8NDX2 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
SLC17A8Q8NDX2 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
SLC17A8Q8NDX2 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
SLC17A8Q8NDX2 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC24.39■■□□□ 1.49
SLC17A8Q8NDX2 TERF1P2-201ENST00000583350 1212 ntBASIC24.39■■□□□ 1.49
SLC17A8Q8NDX2 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC24.39■■□□□ 1.49
SLC17A8Q8NDX2 GCA-201ENST00000233612 1694 ntTSL 2 BASIC24.39■■□□□ 1.49
SLC17A8Q8NDX2 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC24.39■■□□□ 1.49
SLC17A8Q8NDX2 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC24.39■■□□□ 1.49
SLC17A8Q8NDX2 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
SLC17A8Q8NDX2 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
SLC17A8Q8NDX2 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC24.38■■□□□ 1.49
SLC17A8Q8NDX2 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC24.38■■□□□ 1.49
SLC17A8Q8NDX2 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC24.38■■□□□ 1.49
SLC17A8Q8NDX2 AC012414.1-201ENST00000556676 535 ntBASIC24.38■■□□□ 1.49
SLC17A8Q8NDX2 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
SLC17A8Q8NDX2 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC24.38■■□□□ 1.49
SLC17A8Q8NDX2 AP006294.2-201ENST00000641667 209 ntBASIC24.38■■□□□ 1.49
SLC17A8Q8NDX2 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
SLC17A8Q8NDX2 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC24.38■■□□□ 1.49
SLC17A8Q8NDX2 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
SLC17A8Q8NDX2 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC24.38■■□□□ 1.49
SLC17A8Q8NDX2 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC24.37■■□□□ 1.49
SLC17A8Q8NDX2 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
SLC17A8Q8NDX2 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC24.37■■□□□ 1.49
SLC17A8Q8NDX2 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC24.37■■□□□ 1.49
SLC17A8Q8NDX2 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
SLC17A8Q8NDX2 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC24.37■■□□□ 1.49
SLC17A8Q8NDX2 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC24.37■■□□□ 1.49
SLC17A8Q8NDX2 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
SLC17A8Q8NDX2 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC24.36■■□□□ 1.49
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms