Protein–RNA interactions for Protein: Q8NDP4

ZNF439, Zinc finger protein 439, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF439Q8NDP4 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC17.97■□□□□ 0.47
ZNF439Q8NDP4 MIR4466-201ENST00000606121 54 ntBASIC17.97■□□□□ 0.47
ZNF439Q8NDP4 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
ZNF439Q8NDP4 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC17.97■□□□□ 0.47
ZNF439Q8NDP4 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
ZNF439Q8NDP4 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC17.97■□□□□ 0.47
ZNF439Q8NDP4 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
ZNF439Q8NDP4 AC133637.1-201ENST00000624115 1537 ntBASIC17.97■□□□□ 0.47
ZNF439Q8NDP4 AC080038.3-201ENST00000623346 1952 ntBASIC17.97■□□□□ 0.47
ZNF439Q8NDP4 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC17.97■□□□□ 0.47
ZNF439Q8NDP4 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
ZNF439Q8NDP4 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
ZNF439Q8NDP4 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
ZNF439Q8NDP4 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
ZNF439Q8NDP4 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC17.96■□□□□ 0.47
ZNF439Q8NDP4 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
ZNF439Q8NDP4 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
ZNF439Q8NDP4 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
ZNF439Q8NDP4 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
ZNF439Q8NDP4 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC17.96■□□□□ 0.47
ZNF439Q8NDP4 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
ZNF439Q8NDP4 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
ZNF439Q8NDP4 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC17.96■□□□□ 0.47
ZNF439Q8NDP4 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC17.96■□□□□ 0.47
ZNF439Q8NDP4 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
ZNF439Q8NDP4 TRIR-202ENST00000588213 841 ntTSL 3 BASIC17.96■□□□□ 0.47
ZNF439Q8NDP4 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC17.96■□□□□ 0.47
ZNF439Q8NDP4 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC17.96■□□□□ 0.47
ZNF439Q8NDP4 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC17.96■□□□□ 0.47
ZNF439Q8NDP4 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC17.96■□□□□ 0.47
ZNF439Q8NDP4 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC17.96■□□□□ 0.47
ZNF439Q8NDP4 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
ZNF439Q8NDP4 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC17.96■□□□□ 0.47
ZNF439Q8NDP4 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
ZNF439Q8NDP4 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
ZNF439Q8NDP4 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
ZNF439Q8NDP4 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
ZNF439Q8NDP4 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
ZNF439Q8NDP4 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
ZNF439Q8NDP4 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
ZNF439Q8NDP4 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
ZNF439Q8NDP4 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
ZNF439Q8NDP4 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC17.95■□□□□ 0.46
ZNF439Q8NDP4 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
ZNF439Q8NDP4 AC131281.2-201ENST00000520478 145 ntBASIC17.95■□□□□ 0.46
ZNF439Q8NDP4 MIR3181-201ENST00000578512 73 ntBASIC17.95■□□□□ 0.46
ZNF439Q8NDP4 AC092171.4-201ENST00000609130 632 ntBASIC17.95■□□□□ 0.46
ZNF439Q8NDP4 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
ZNF439Q8NDP4 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC17.95■□□□□ 0.46
ZNF439Q8NDP4 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
ZNF439Q8NDP4 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC17.95■□□□□ 0.46
ZNF439Q8NDP4 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
ZNF439Q8NDP4 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
ZNF439Q8NDP4 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC17.95■□□□□ 0.46
ZNF439Q8NDP4 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
ZNF439Q8NDP4 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
ZNF439Q8NDP4 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
ZNF439Q8NDP4 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC17.94■□□□□ 0.46
ZNF439Q8NDP4 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC17.94■□□□□ 0.46
ZNF439Q8NDP4 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
ZNF439Q8NDP4 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
ZNF439Q8NDP4 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
ZNF439Q8NDP4 CA15P2-201ENST00000611168 834 ntBASIC17.94■□□□□ 0.46
ZNF439Q8NDP4 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
ZNF439Q8NDP4 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
ZNF439Q8NDP4 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC17.94■□□□□ 0.46
ZNF439Q8NDP4 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
ZNF439Q8NDP4 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
ZNF439Q8NDP4 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
ZNF439Q8NDP4 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
ZNF439Q8NDP4 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
ZNF439Q8NDP4 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC17.93■□□□□ 0.46
ZNF439Q8NDP4 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
ZNF439Q8NDP4 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC17.93■□□□□ 0.46
ZNF439Q8NDP4 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
ZNF439Q8NDP4 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC17.93■□□□□ 0.46
ZNF439Q8NDP4 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
ZNF439Q8NDP4 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
ZNF439Q8NDP4 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
ZNF439Q8NDP4 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
ZNF439Q8NDP4 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
ZNF439Q8NDP4 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
ZNF439Q8NDP4 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
ZNF439Q8NDP4 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
ZNF439Q8NDP4 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC17.92■□□□□ 0.46
ZNF439Q8NDP4 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
ZNF439Q8NDP4 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC17.92■□□□□ 0.46
ZNF439Q8NDP4 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
ZNF439Q8NDP4 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
ZNF439Q8NDP4 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
ZNF439Q8NDP4 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
ZNF439Q8NDP4 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
ZNF439Q8NDP4 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC17.92■□□□□ 0.46
ZNF439Q8NDP4 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
ZNF439Q8NDP4 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
ZNF439Q8NDP4 AC137767.1-201ENST00000602918 1920 ntBASIC17.92■□□□□ 0.46
ZNF439Q8NDP4 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
ZNF439Q8NDP4 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
ZNF439Q8NDP4 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC17.91■□□□□ 0.46
ZNF439Q8NDP4 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC17.91■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms